Gene : Phvul.006G184800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31579:SF11 - EXPRESSED PROTEIN Genomic Order:  1861
Name:  ? Phvul.006G184800 Secondary Identifier:  ? PAC:37174145
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G184800 0.5kb upstream 0.5kb upstream 2432 true Chr06: 28591379-28593810 Phaseolus vulgaris
Phvul.006G184800 0.5kb upstream 0.5kb upstream 500 false Chr06: 28593311-28593810 Phaseolus vulgaris
Phvul.006G184800 0.5kb downstream 0.5kb downstream 2432 true Chr06: 28590879-28593310 Phaseolus vulgaris
Phvul.006G184800 0.5kb downstream 0.5kb downstream 500 false Chr06: 28590879-28591378 Phaseolus vulgaris
Phvul.006G184800 1.0kb upstream 1.0kb upstream 2932 true Chr06: 28591379-28594310 Phaseolus vulgaris
Phvul.006G184800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 28593311-28594310 Phaseolus vulgaris
Phvul.006G184800 1.0kb downstream 1.0kb downstream 2932 true Chr06: 28590379-28593310 Phaseolus vulgaris
Phvul.006G184800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 28590379-28591378 Phaseolus vulgaris
Phvul.006G184800 2.0kb upstream 2.0kb upstream 3932 true Chr06: 28591379-28595310 Phaseolus vulgaris
Phvul.006G184800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 28593311-28595310 Phaseolus vulgaris
Phvul.006G184800 2.0kb downstream 2.0kb downstream 3932 true Chr06: 28589379-28593310 Phaseolus vulgaris
Phvul.006G184800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 28589379-28591378 Phaseolus vulgaris
Phvul.006G184800 5.0kb upstream 5.0kb upstream 6932 true Chr06: 28591379-28598310 Phaseolus vulgaris
Phvul.006G184800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 28593311-28598310 Phaseolus vulgaris
Phvul.006G184800 5.0kb downstream 5.0kb downstream 6932 true Chr06: 28586379-28593310 Phaseolus vulgaris
Phvul.006G184800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 28586379-28591378 Phaseolus vulgaris
Phvul.006G184800 10.0kb upstream 10.0kb upstream 11932 true Chr06: 28591379-28603310 Phaseolus vulgaris
Phvul.006G184800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 28593311-28603310 Phaseolus vulgaris
Phvul.006G184800 10.0kb downstream 10.0kb downstream 11932 true Chr06: 28581379-28593310 Phaseolus vulgaris
Phvul.006G184800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 28581379-28591378 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303509 5265 Fabidae View MSA
124071276 5270 Rosid View MSA
123751272 5271 Pentapetalae View MSA
122785688 5272 Eudicot View MSA
122045708 5273 Angiosperm View MSA
123429021 5275 Viridiplantae View MSA
121310489 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.4318 0.0 107.539 High High
cufflinks 14.6055 0.0 38.6346    
cufflinks 1.59622 0.0 5.29887    
cufflinks 13.0228 0.0 34.8503    
cufflinks 23.797 0.0 61.7337    
cufflinks 0.277 0.0 1.08156 Low Low
cufflinks 0.576533 0.0 2.10662    
cufflinks 0.155569 0.0 0.634003 Low Low
cufflinks 6.76898 0.0 18.9444    
cufflinks 35.6161 0.0 92.1453   High
cufflinks 1.02334 0.0 3.5636    

0 Strain