Gene : Phvul.006G184600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13935:SF46 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  1859
Name:  ? Phvul.006G184600 Secondary Identifier:  ? PAC:37173400
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G184600 0.5kb upstream 0.5kb upstream 2003 true Chr06: 28580138-28582140 Phaseolus vulgaris
Phvul.006G184600 0.5kb upstream 0.5kb upstream 500 false Chr06: 28580138-28580637 Phaseolus vulgaris
Phvul.006G184600 0.5kb downstream 0.5kb downstream 2003 true Chr06: 28580638-28582640 Phaseolus vulgaris
Phvul.006G184600 0.5kb downstream 0.5kb downstream 500 false Chr06: 28582141-28582640 Phaseolus vulgaris
Phvul.006G184600 1.0kb upstream 1.0kb upstream 2503 true Chr06: 28579638-28582140 Phaseolus vulgaris
Phvul.006G184600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 28579638-28580637 Phaseolus vulgaris
Phvul.006G184600 1.0kb downstream 1.0kb downstream 2503 true Chr06: 28580638-28583140 Phaseolus vulgaris
Phvul.006G184600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 28582141-28583140 Phaseolus vulgaris
Phvul.006G184600 2.0kb upstream 2.0kb upstream 3503 true Chr06: 28578638-28582140 Phaseolus vulgaris
Phvul.006G184600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 28578638-28580637 Phaseolus vulgaris
Phvul.006G184600 2.0kb downstream 2.0kb downstream 3503 true Chr06: 28580638-28584140 Phaseolus vulgaris
Phvul.006G184600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 28582141-28584140 Phaseolus vulgaris
Phvul.006G184600 5.0kb upstream 5.0kb upstream 6503 true Chr06: 28575638-28582140 Phaseolus vulgaris
Phvul.006G184600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 28575638-28580637 Phaseolus vulgaris
Phvul.006G184600 5.0kb downstream 5.0kb downstream 6503 true Chr06: 28580638-28587140 Phaseolus vulgaris
Phvul.006G184600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 28582141-28587140 Phaseolus vulgaris
Phvul.006G184600 10.0kb upstream 10.0kb upstream 11503 true Chr06: 28570638-28582140 Phaseolus vulgaris
Phvul.006G184600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 28570638-28580637 Phaseolus vulgaris
Phvul.006G184600 10.0kb downstream 10.0kb downstream 11503 true Chr06: 28580638-28592140 Phaseolus vulgaris
Phvul.006G184600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 28582141-28592140 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040931 5273 Angiosperm View MSA
122309739 5265 Fabidae View MSA
124073436 5270 Rosid View MSA
123745471 5271 Pentapetalae View MSA
122795033 5272 Eudicot View MSA
121309769 5274 Embryophyte View MSA
123347432 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.46751 0.0 8.56527    
cufflinks 6.4001 0.0 20.0076    
cufflinks 2.21092 0.0 7.77407    
cufflinks 2.62725 0.0 9.14873    
cufflinks 5.11989 0.0 16.682    
cufflinks 1.77047 0.0 6.36332    
cufflinks 2.54334 0.0 8.78619    
cufflinks 8.33979 0.0 25.0057   High
cufflinks 0.120571 0.0 0.544797 Low Low
cufflinks 0.476766 0.0 1.91704   Low
cufflinks 6.04456 0.0 19.171    

0 Strain