Gene : Phvul.009G082000 P. vulgaris v2.1
Genomic Order:  843 Name:  ? Phvul.009G082000
Secondary Identifier:  ? PAC:37150964
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G082000 0.5kb upstream 0.5kb upstream 3363 true Chr09: 13547643-13551005 Phaseolus vulgaris
Phvul.009G082000 0.5kb upstream 0.5kb upstream 500 false Chr09: 13550506-13551005 Phaseolus vulgaris
Phvul.009G082000 0.5kb downstream 0.5kb downstream 3363 true Chr09: 13547143-13550505 Phaseolus vulgaris
Phvul.009G082000 0.5kb downstream 0.5kb downstream 500 false Chr09: 13547143-13547642 Phaseolus vulgaris
Phvul.009G082000 1.0kb upstream 1.0kb upstream 3863 true Chr09: 13547643-13551505 Phaseolus vulgaris
Phvul.009G082000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 13550506-13551505 Phaseolus vulgaris
Phvul.009G082000 1.0kb downstream 1.0kb downstream 3863 true Chr09: 13546643-13550505 Phaseolus vulgaris
Phvul.009G082000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 13546643-13547642 Phaseolus vulgaris
Phvul.009G082000 2.0kb upstream 2.0kb upstream 4863 true Chr09: 13547643-13552505 Phaseolus vulgaris
Phvul.009G082000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 13550506-13552505 Phaseolus vulgaris
Phvul.009G082000 2.0kb downstream 2.0kb downstream 4863 true Chr09: 13545643-13550505 Phaseolus vulgaris
Phvul.009G082000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 13545643-13547642 Phaseolus vulgaris
Phvul.009G082000 5.0kb upstream 5.0kb upstream 7863 true Chr09: 13547643-13555505 Phaseolus vulgaris
Phvul.009G082000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 13550506-13555505 Phaseolus vulgaris
Phvul.009G082000 5.0kb downstream 5.0kb downstream 7863 true Chr09: 13542643-13550505 Phaseolus vulgaris
Phvul.009G082000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 13542643-13547642 Phaseolus vulgaris
Phvul.009G082000 10.0kb upstream 10.0kb upstream 12863 true Chr09: 13547643-13560505 Phaseolus vulgaris
Phvul.009G082000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 13550506-13560505 Phaseolus vulgaris
Phvul.009G082000 10.0kb downstream 10.0kb downstream 12863 true Chr09: 13537643-13550505 Phaseolus vulgaris
Phvul.009G082000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 13537643-13547642 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300886 5265 Fabidae View MSA
124066287 5270 Rosid View MSA
123742966 5271 Pentapetalae View MSA
122792442 5272 Eudicot View MSA
122049393 5273 Angiosperm View MSA
121345648 5274 Embryophyte View MSA
123425550 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.1255 0.0 85.1298    
cufflinks 23.6939 0.0 64.372    
cufflinks 110.516 0.0 289.065 High High
cufflinks 16.7678 0.0 46.9517    
cufflinks 18.6886 0.0 51.8052    
cufflinks 33.3172 0.0 88.1961 High  
cufflinks 1.6865 0.0 6.06467   Low
cufflinks 3.00708 0.0 10.1684   Low
cufflinks 3.58672 0.0 11.8997   Low
cufflinks 43.2834 0.0 112.845 High  
cufflinks 12.6694 0.0 36.461    

0 Strain