Gene : Phvul.006G186600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11772//PTHR11772:SF19 - ASPARAGINE SYNTHETASE // SUBFAMILY NOT NAMED Genomic Order:  1880
Name:  ? Phvul.006G186600 Secondary Identifier:  ? PAC:37172238
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G186600 0.5kb upstream 0.5kb upstream 2729 true Chr06: 28737332-28740060 Phaseolus vulgaris
Phvul.006G186600 0.5kb upstream 0.5kb upstream 500 false Chr06: 28739561-28740060 Phaseolus vulgaris
Phvul.006G186600 0.5kb downstream 0.5kb downstream 2729 true Chr06: 28736832-28739560 Phaseolus vulgaris
Phvul.006G186600 0.5kb downstream 0.5kb downstream 500 false Chr06: 28736832-28737331 Phaseolus vulgaris
Phvul.006G186600 1.0kb upstream 1.0kb upstream 3229 true Chr06: 28737332-28740560 Phaseolus vulgaris
Phvul.006G186600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 28739561-28740560 Phaseolus vulgaris
Phvul.006G186600 1.0kb downstream 1.0kb downstream 3229 true Chr06: 28736332-28739560 Phaseolus vulgaris
Phvul.006G186600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 28736332-28737331 Phaseolus vulgaris
Phvul.006G186600 2.0kb upstream 2.0kb upstream 4229 true Chr06: 28737332-28741560 Phaseolus vulgaris
Phvul.006G186600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 28739561-28741560 Phaseolus vulgaris
Phvul.006G186600 2.0kb downstream 2.0kb downstream 4229 true Chr06: 28735332-28739560 Phaseolus vulgaris
Phvul.006G186600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 28735332-28737331 Phaseolus vulgaris
Phvul.006G186600 5.0kb upstream 5.0kb upstream 7229 true Chr06: 28737332-28744560 Phaseolus vulgaris
Phvul.006G186600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 28739561-28744560 Phaseolus vulgaris
Phvul.006G186600 5.0kb downstream 5.0kb downstream 7229 true Chr06: 28732332-28739560 Phaseolus vulgaris
Phvul.006G186600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 28732332-28737331 Phaseolus vulgaris
Phvul.006G186600 10.0kb upstream 10.0kb upstream 12229 true Chr06: 28737332-28749560 Phaseolus vulgaris
Phvul.006G186600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 28739561-28749560 Phaseolus vulgaris
Phvul.006G186600 10.0kb downstream 10.0kb downstream 12229 true Chr06: 28727332-28739560 Phaseolus vulgaris
Phvul.006G186600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 28727332-28737331 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791903 5273 Angiosperm View MSA
122303174 5265 Fabidae View MSA
124037815 5270 Rosid View MSA
123742459 5271 Pentapetalae View MSA
122795194 5272 Eudicot View MSA
121063172 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 273.881 0.0 829.108 High High
cufflinks 126.509 0.0 346.592 High High
cufflinks 10.3621 0.0 28.8753    
cufflinks 17.8035 0.0 47.6904    
cufflinks 15.916 0.0 42.9764    
cufflinks 0.832608 0.0 3.04859   Low
cufflinks 0.563814 0.0 2.13528   Low
cufflinks 0.974732 0.0 3.51094    
cufflinks 1.37551 0.0 4.81112    
cufflinks 213.496 0.0 620.772 High High
cufflinks 4.15135 0.0 12.8775    

0 Strain