Gene : Phvul.006G187300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13780:SF39 - CBS DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1887
Name:  ? Phvul.006G187300 Secondary Identifier:  ? PAC:37172245
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G187300 0.5kb upstream 0.5kb upstream 2433 true Chr06: 28786588-28789020 Phaseolus vulgaris
Phvul.006G187300 0.5kb upstream 0.5kb upstream 500 false Chr06: 28788521-28789020 Phaseolus vulgaris
Phvul.006G187300 0.5kb downstream 0.5kb downstream 2433 true Chr06: 28786088-28788520 Phaseolus vulgaris
Phvul.006G187300 0.5kb downstream 0.5kb downstream 500 false Chr06: 28786088-28786587 Phaseolus vulgaris
Phvul.006G187300 1.0kb upstream 1.0kb upstream 2933 true Chr06: 28786588-28789520 Phaseolus vulgaris
Phvul.006G187300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 28788521-28789520 Phaseolus vulgaris
Phvul.006G187300 1.0kb downstream 1.0kb downstream 2933 true Chr06: 28785588-28788520 Phaseolus vulgaris
Phvul.006G187300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 28785588-28786587 Phaseolus vulgaris
Phvul.006G187300 2.0kb upstream 2.0kb upstream 3933 true Chr06: 28786588-28790520 Phaseolus vulgaris
Phvul.006G187300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 28788521-28790520 Phaseolus vulgaris
Phvul.006G187300 2.0kb downstream 2.0kb downstream 3933 true Chr06: 28784588-28788520 Phaseolus vulgaris
Phvul.006G187300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 28784588-28786587 Phaseolus vulgaris
Phvul.006G187300 5.0kb upstream 5.0kb upstream 6933 true Chr06: 28786588-28793520 Phaseolus vulgaris
Phvul.006G187300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 28788521-28793520 Phaseolus vulgaris
Phvul.006G187300 5.0kb downstream 5.0kb downstream 6933 true Chr06: 28781588-28788520 Phaseolus vulgaris
Phvul.006G187300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 28781588-28786587 Phaseolus vulgaris
Phvul.006G187300 10.0kb upstream 10.0kb upstream 11933 true Chr06: 28786588-28798520 Phaseolus vulgaris
Phvul.006G187300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 28788521-28798520 Phaseolus vulgaris
Phvul.006G187300 10.0kb downstream 10.0kb downstream 11933 true Chr06: 28776588-28788520 Phaseolus vulgaris
Phvul.006G187300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 28776588-28786587 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301461 5265 Fabidae View MSA
124069428 5270 Rosid View MSA
123752879 5271 Pentapetalae View MSA
122796215 5272 Eudicot View MSA
122042331 5273 Angiosperm View MSA
121351611 5274 Embryophyte View MSA
123382245 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.6992 0.0 84.6717    
cufflinks 14.1543 0.0 37.3326    
cufflinks 27.8439 0.0 71.9719    
cufflinks 25.3249 0.0 65.4602    
cufflinks 23.5573 0.0 60.9163    
cufflinks 50.2818 0.0 132.212 High High
cufflinks 8.6013 0.0 23.4519   Low
cufflinks 10.9497 0.0 29.4483    
cufflinks 5.31165 0.0 15.1381   Low
cufflinks 81.4292 0.0 222.214 High High
cufflinks 20.7332 0.0 53.7312    

0 Strain