Gene : Phvul.009G085300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31319:SF4 - ZINC FINGER PROTEIN CONSTANS-LIKE 3-RELATED Genomic Order:  878
Name:  ? Phvul.009G085300 Secondary Identifier:  ? PAC:37150549
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G085300 0.5kb upstream 0.5kb upstream 1882 true Chr09: 13956111-13957992 Phaseolus vulgaris
Phvul.009G085300 0.5kb upstream 0.5kb upstream 500 false Chr09: 13956111-13956610 Phaseolus vulgaris
Phvul.009G085300 0.5kb downstream 0.5kb downstream 1882 true Chr09: 13956611-13958492 Phaseolus vulgaris
Phvul.009G085300 0.5kb downstream 0.5kb downstream 500 false Chr09: 13957993-13958492 Phaseolus vulgaris
Phvul.009G085300 1.0kb upstream 1.0kb upstream 2382 true Chr09: 13955611-13957992 Phaseolus vulgaris
Phvul.009G085300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 13955611-13956610 Phaseolus vulgaris
Phvul.009G085300 1.0kb downstream 1.0kb downstream 2382 true Chr09: 13956611-13958992 Phaseolus vulgaris
Phvul.009G085300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 13957993-13958992 Phaseolus vulgaris
Phvul.009G085300 2.0kb upstream 2.0kb upstream 3382 true Chr09: 13954611-13957992 Phaseolus vulgaris
Phvul.009G085300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 13954611-13956610 Phaseolus vulgaris
Phvul.009G085300 2.0kb downstream 2.0kb downstream 3382 true Chr09: 13956611-13959992 Phaseolus vulgaris
Phvul.009G085300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 13957993-13959992 Phaseolus vulgaris
Phvul.009G085300 5.0kb upstream 5.0kb upstream 6382 true Chr09: 13951611-13957992 Phaseolus vulgaris
Phvul.009G085300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 13951611-13956610 Phaseolus vulgaris
Phvul.009G085300 5.0kb downstream 5.0kb downstream 6382 true Chr09: 13956611-13962992 Phaseolus vulgaris
Phvul.009G085300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 13957993-13962992 Phaseolus vulgaris
Phvul.009G085300 10.0kb upstream 10.0kb upstream 11382 true Chr09: 13946611-13957992 Phaseolus vulgaris
Phvul.009G085300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 13946611-13956610 Phaseolus vulgaris
Phvul.009G085300 10.0kb downstream 10.0kb downstream 11382 true Chr09: 13956611-13967992 Phaseolus vulgaris
Phvul.009G085300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 13957993-13967992 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315046 5265 Fabidae View MSA
124065219 5270 Rosid View MSA
123752107 5271 Pentapetalae View MSA
122792098 5272 Eudicot View MSA
122049836 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121345556 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 144.245 0.0 411.734 High  
cufflinks 176.794 0.0 516.385 High  
cufflinks 183.979 0.0 534.484 High  
cufflinks 95.0206 0.0 262.052 High  
cufflinks 227.776 0.0 698.822 High  
cufflinks 107.391 0.0 295.323 High  
cufflinks 20.0103 0.0 52.0623   Low
cufflinks 11.6776 0.0 31.6659   Low
cufflinks 40.1278 0.0 104.14 High  
cufflinks 221.074 0.0 669.563 High  
cufflinks 186.732 0.0 557.151 High  

0 Strain