Gene : Phvul.006G188600 P. vulgaris v2.1
Genomic Order:  1900 Name:  ? Phvul.006G188600
Secondary Identifier:  ? PAC:37172179
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G188600 0.5kb upstream 0.5kb upstream 3557 true Chr06: 28892383-28895939 Phaseolus vulgaris
Phvul.006G188600 0.5kb upstream 0.5kb upstream 500 false Chr06: 28895440-28895939 Phaseolus vulgaris
Phvul.006G188600 0.5kb downstream 0.5kb downstream 3557 true Chr06: 28891883-28895439 Phaseolus vulgaris
Phvul.006G188600 0.5kb downstream 0.5kb downstream 500 false Chr06: 28891883-28892382 Phaseolus vulgaris
Phvul.006G188600 1.0kb upstream 1.0kb upstream 4057 true Chr06: 28892383-28896439 Phaseolus vulgaris
Phvul.006G188600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 28895440-28896439 Phaseolus vulgaris
Phvul.006G188600 1.0kb downstream 1.0kb downstream 4057 true Chr06: 28891383-28895439 Phaseolus vulgaris
Phvul.006G188600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 28891383-28892382 Phaseolus vulgaris
Phvul.006G188600 2.0kb upstream 2.0kb upstream 5057 true Chr06: 28892383-28897439 Phaseolus vulgaris
Phvul.006G188600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 28895440-28897439 Phaseolus vulgaris
Phvul.006G188600 2.0kb downstream 2.0kb downstream 5057 true Chr06: 28890383-28895439 Phaseolus vulgaris
Phvul.006G188600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 28890383-28892382 Phaseolus vulgaris
Phvul.006G188600 5.0kb upstream 5.0kb upstream 8057 true Chr06: 28892383-28900439 Phaseolus vulgaris
Phvul.006G188600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 28895440-28900439 Phaseolus vulgaris
Phvul.006G188600 5.0kb downstream 5.0kb downstream 8057 true Chr06: 28887383-28895439 Phaseolus vulgaris
Phvul.006G188600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 28887383-28892382 Phaseolus vulgaris
Phvul.006G188600 10.0kb upstream 10.0kb upstream 13057 true Chr06: 28892383-28905439 Phaseolus vulgaris
Phvul.006G188600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 28895440-28905439 Phaseolus vulgaris
Phvul.006G188600 10.0kb downstream 10.0kb downstream 13057 true Chr06: 28882383-28895439 Phaseolus vulgaris
Phvul.006G188600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 28882383-28892382 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296673 5265 Fabidae View MSA
124069520 5270 Rosid View MSA
123747177 5271 Pentapetalae View MSA
122796256 5272 Eudicot View MSA
122048437 5273 Angiosperm View MSA
121310973 5274 Embryophyte View MSA
123427495 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.352627 0.0 2.32371 Low  
cufflinks 0.0513554 0.0 0.235943 Low Low
cufflinks 0.123425 0.0 0.507791 Low  
cufflinks 0.270421 0.0 1.35378 Low  
cufflinks 0.0575687 0.0 0.255958 Low Low
cufflinks 0.0928802 0.0 0.394547 Low  
cufflinks 0.825775 0.0 4.41624   High
cufflinks 0.71033 0.0 3.89385   High
cufflinks 1.72657 0.0 8.76365   High
cufflinks 0.121279 0.0 0.49965 Low  
cufflinks 0.136083 0.0 0.551939 Low  

0 Strain