Gene : Phvul.009G084800 P. vulgaris v2.1
Defline:  (1 of 9) K11855 - ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] (USP36_42) Genomic Order:  873
Name:  ? Phvul.009G084800 Secondary Identifier:  ? PAC:37150349
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G084800 0.5kb upstream 0.5kb upstream 8491 true Chr09: 13899436-13907926 Phaseolus vulgaris
Phvul.009G084800 0.5kb upstream 0.5kb upstream 500 false Chr09: 13907427-13907926 Phaseolus vulgaris
Phvul.009G084800 0.5kb downstream 0.5kb downstream 8491 true Chr09: 13898936-13907426 Phaseolus vulgaris
Phvul.009G084800 0.5kb downstream 0.5kb downstream 500 false Chr09: 13898936-13899435 Phaseolus vulgaris
Phvul.009G084800 1.0kb upstream 1.0kb upstream 8991 true Chr09: 13899436-13908426 Phaseolus vulgaris
Phvul.009G084800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 13907427-13908426 Phaseolus vulgaris
Phvul.009G084800 1.0kb downstream 1.0kb downstream 8991 true Chr09: 13898436-13907426 Phaseolus vulgaris
Phvul.009G084800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 13898436-13899435 Phaseolus vulgaris
Phvul.009G084800 2.0kb upstream 2.0kb upstream 9991 true Chr09: 13899436-13909426 Phaseolus vulgaris
Phvul.009G084800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 13907427-13909426 Phaseolus vulgaris
Phvul.009G084800 2.0kb downstream 2.0kb downstream 9991 true Chr09: 13897436-13907426 Phaseolus vulgaris
Phvul.009G084800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 13897436-13899435 Phaseolus vulgaris
Phvul.009G084800 5.0kb upstream 5.0kb upstream 12991 true Chr09: 13899436-13912426 Phaseolus vulgaris
Phvul.009G084800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 13907427-13912426 Phaseolus vulgaris
Phvul.009G084800 5.0kb downstream 5.0kb downstream 12991 true Chr09: 13894436-13907426 Phaseolus vulgaris
Phvul.009G084800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 13894436-13899435 Phaseolus vulgaris
Phvul.009G084800 10.0kb upstream 10.0kb upstream 17991 true Chr09: 13899436-13917426 Phaseolus vulgaris
Phvul.009G084800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 13907427-13917426 Phaseolus vulgaris
Phvul.009G084800 10.0kb downstream 10.0kb downstream 17991 true Chr09: 13889436-13907426 Phaseolus vulgaris
Phvul.009G084800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 13889436-13899435 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312003 5265 Fabidae View MSA
124069619 5270 Rosid View MSA
123738264 5271 Pentapetalae View MSA
122797340 5272 Eudicot View MSA
122048060 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.6905 0.0 30.3009    
cufflinks 9.48613 0.0 24.7524   Low
cufflinks 16.7839 0.0 43.4104   High
cufflinks 9.67915 0.0 25.3086   Low
cufflinks 12.0094 0.0 31.1507    
cufflinks 11.9265 0.0 30.8968    
cufflinks 13.3769 0.0 34.588    
cufflinks 11.2473 0.0 29.1483    
cufflinks 15.2577 0.0 39.4397   High
cufflinks 13.6741 0.0 35.3641    
cufflinks 10.8887 0.0 28.2986    

0 Strain