Gene : Phvul.006G189400 P. vulgaris v2.1
Genomic Order:  1908 Name:  ? Phvul.006G189400
Secondary Identifier:  ? PAC:37173323
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G189400 0.5kb upstream 0.5kb upstream 1675 true Chr06: 28963438-28965112 Phaseolus vulgaris
Phvul.006G189400 0.5kb upstream 0.5kb upstream 500 false Chr06: 28964613-28965112 Phaseolus vulgaris
Phvul.006G189400 0.5kb downstream 0.5kb downstream 1675 true Chr06: 28962938-28964612 Phaseolus vulgaris
Phvul.006G189400 0.5kb downstream 0.5kb downstream 500 false Chr06: 28962938-28963437 Phaseolus vulgaris
Phvul.006G189400 1.0kb upstream 1.0kb upstream 2175 true Chr06: 28963438-28965612 Phaseolus vulgaris
Phvul.006G189400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 28964613-28965612 Phaseolus vulgaris
Phvul.006G189400 1.0kb downstream 1.0kb downstream 2175 true Chr06: 28962438-28964612 Phaseolus vulgaris
Phvul.006G189400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 28962438-28963437 Phaseolus vulgaris
Phvul.006G189400 2.0kb upstream 2.0kb upstream 3175 true Chr06: 28963438-28966612 Phaseolus vulgaris
Phvul.006G189400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 28964613-28966612 Phaseolus vulgaris
Phvul.006G189400 2.0kb downstream 2.0kb downstream 3175 true Chr06: 28961438-28964612 Phaseolus vulgaris
Phvul.006G189400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 28961438-28963437 Phaseolus vulgaris
Phvul.006G189400 5.0kb upstream 5.0kb upstream 6175 true Chr06: 28963438-28969612 Phaseolus vulgaris
Phvul.006G189400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 28964613-28969612 Phaseolus vulgaris
Phvul.006G189400 5.0kb downstream 5.0kb downstream 6175 true Chr06: 28958438-28964612 Phaseolus vulgaris
Phvul.006G189400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 28958438-28963437 Phaseolus vulgaris
Phvul.006G189400 10.0kb upstream 10.0kb upstream 11175 true Chr06: 28963438-28974612 Phaseolus vulgaris
Phvul.006G189400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 28964613-28974612 Phaseolus vulgaris
Phvul.006G189400 10.0kb downstream 10.0kb downstream 11175 true Chr06: 28953438-28964612 Phaseolus vulgaris
Phvul.006G189400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 28953438-28963437 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308381 5265 Fabidae View MSA
124071059 5270 Rosid View MSA
123744604 5271 Pentapetalae View MSA
122796062 5272 Eudicot View MSA
122050199 5273 Angiosperm View MSA
121311794 5274 Embryophyte View MSA
123349041 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.47205 0.0 5.23208    
cufflinks 2.00912 0.0 6.91205    
cufflinks 6.55504 0.0 19.6422   High
cufflinks 6.13648 0.0 18.5644   High
cufflinks 2.02791 0.0 6.98248    
cufflinks 6.86162 0.0 20.4944   High
cufflinks 0.850829 0.0 3.1667   Low
cufflinks 2.20011 0.0 7.43963    
cufflinks 1.20359 0.0 4.35313    
cufflinks 0.535842 0.0 2.07837   Low
cufflinks 2.09463 0.0 7.20126    

0 Strain