Gene : Phvul.009G085700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12136//PTHR12136:SF38 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR // SUBFAMILY NOT NAMED Genomic Order:  882
Name:  ? Phvul.009G085700 Secondary Identifier:  ? PAC:37150031
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G085700 0.5kb upstream 0.5kb upstream 1647 true Chr09: 13999989-14001635 Phaseolus vulgaris
Phvul.009G085700 0.5kb upstream 0.5kb upstream 500 false Chr09: 13999989-14000488 Phaseolus vulgaris
Phvul.009G085700 0.5kb downstream 0.5kb downstream 1647 true Chr09: 14000489-14002135 Phaseolus vulgaris
Phvul.009G085700 0.5kb downstream 0.5kb downstream 500 false Chr09: 14001636-14002135 Phaseolus vulgaris
Phvul.009G085700 1.0kb upstream 1.0kb upstream 2147 true Chr09: 13999489-14001635 Phaseolus vulgaris
Phvul.009G085700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 13999489-14000488 Phaseolus vulgaris
Phvul.009G085700 1.0kb downstream 1.0kb downstream 2147 true Chr09: 14000489-14002635 Phaseolus vulgaris
Phvul.009G085700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 14001636-14002635 Phaseolus vulgaris
Phvul.009G085700 2.0kb upstream 2.0kb upstream 3147 true Chr09: 13998489-14001635 Phaseolus vulgaris
Phvul.009G085700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 13998489-14000488 Phaseolus vulgaris
Phvul.009G085700 2.0kb downstream 2.0kb downstream 3147 true Chr09: 14000489-14003635 Phaseolus vulgaris
Phvul.009G085700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 14001636-14003635 Phaseolus vulgaris
Phvul.009G085700 5.0kb upstream 5.0kb upstream 6147 true Chr09: 13995489-14001635 Phaseolus vulgaris
Phvul.009G085700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 13995489-14000488 Phaseolus vulgaris
Phvul.009G085700 5.0kb downstream 5.0kb downstream 6147 true Chr09: 14000489-14006635 Phaseolus vulgaris
Phvul.009G085700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 14001636-14006635 Phaseolus vulgaris
Phvul.009G085700 10.0kb upstream 10.0kb upstream 11147 true Chr09: 13990489-14001635 Phaseolus vulgaris
Phvul.009G085700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 13990489-14000488 Phaseolus vulgaris
Phvul.009G085700 10.0kb downstream 10.0kb downstream 11147 true Chr09: 14000489-14011635 Phaseolus vulgaris
Phvul.009G085700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 14001636-14011635 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301077 5265 Fabidae View MSA
124064079 5270 Rosid View MSA
123745127 5271 Pentapetalae View MSA
122790328 5272 Eudicot View MSA
122048003 5273 Angiosperm View MSA
121346001 5274 Embryophyte View MSA
123380307 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.1088 0.0 109.293 High  
cufflinks 33.7512 0.0 87.2463 High  
cufflinks 35.2701 0.0 91.1681    
cufflinks 38.3462 0.0 99.5076 High  
cufflinks 38.6161 0.0 100.123 High  
cufflinks 27.153 0.0 70.3038   Low
cufflinks 43.5667 0.0 113.576 High  
cufflinks 39.6827 0.0 102.79 High  
cufflinks 33.5935 0.0 86.9251 High  
cufflinks 75.1368 0.0 201.122 High High
cufflinks 38.4419 0.0 99.6977 High  

0 Strain