Gene : Phvul.009G072200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24206:SF35 - TRANSCRIPTION FACTOR-RELATED Genomic Order:  742
Name:  ? Phvul.009G072200 Secondary Identifier:  ? PAC:37151769
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G072200 0.5kb upstream 0.5kb upstream 2752 true Chr09: 12404402-12407153 Phaseolus vulgaris
Phvul.009G072200 0.5kb upstream 0.5kb upstream 500 false Chr09: 12404402-12404901 Phaseolus vulgaris
Phvul.009G072200 0.5kb downstream 0.5kb downstream 2752 true Chr09: 12404902-12407653 Phaseolus vulgaris
Phvul.009G072200 0.5kb downstream 0.5kb downstream 500 false Chr09: 12407154-12407653 Phaseolus vulgaris
Phvul.009G072200 1.0kb upstream 1.0kb upstream 3252 true Chr09: 12403902-12407153 Phaseolus vulgaris
Phvul.009G072200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 12403902-12404901 Phaseolus vulgaris
Phvul.009G072200 1.0kb downstream 1.0kb downstream 3252 true Chr09: 12404902-12408153 Phaseolus vulgaris
Phvul.009G072200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 12407154-12408153 Phaseolus vulgaris
Phvul.009G072200 2.0kb upstream 2.0kb upstream 4252 true Chr09: 12402902-12407153 Phaseolus vulgaris
Phvul.009G072200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 12402902-12404901 Phaseolus vulgaris
Phvul.009G072200 2.0kb downstream 2.0kb downstream 4252 true Chr09: 12404902-12409153 Phaseolus vulgaris
Phvul.009G072200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 12407154-12409153 Phaseolus vulgaris
Phvul.009G072200 5.0kb upstream 5.0kb upstream 7252 true Chr09: 12399902-12407153 Phaseolus vulgaris
Phvul.009G072200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 12399902-12404901 Phaseolus vulgaris
Phvul.009G072200 5.0kb downstream 5.0kb downstream 7252 true Chr09: 12404902-12412153 Phaseolus vulgaris
Phvul.009G072200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 12407154-12412153 Phaseolus vulgaris
Phvul.009G072200 10.0kb upstream 10.0kb upstream 12252 true Chr09: 12394902-12407153 Phaseolus vulgaris
Phvul.009G072200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 12394902-12404901 Phaseolus vulgaris
Phvul.009G072200 10.0kb downstream 10.0kb downstream 12252 true Chr09: 12404902-12417153 Phaseolus vulgaris
Phvul.009G072200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 12407154-12417153 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309325 5265 Fabidae View MSA
124066867 5270 Rosid View MSA
123744734 5271 Pentapetalae View MSA
122789493 5272 Eudicot View MSA
122049992 5273 Angiosperm View MSA
121348284 5274 Embryophyte View MSA
123426269 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.9764 0.0 48.2523    
cufflinks 25.1639 0.0 65.9219    
cufflinks 82.2079 0.0 216.944 High High
cufflinks 23.3759 0.0 61.7    
cufflinks 62.7081 0.0 162.743 High  
cufflinks 34.7598 0.0 90.0228 High  
cufflinks 17.3702 0.0 46.5777    
cufflinks 2.60877 0.0 8.4789   Low
cufflinks 14.2893 0.0 38.8991    
cufflinks 83.9379 0.0 220.99 High High
cufflinks 77.1556 0.0 201.88 High  

0 Strain