Gene : Phvul.006G175200 P. vulgaris v2.1
Defline:  (1 of 8) 1.13.11.19 - Cysteamine dioxygenase / Persulfurase Genomic Order:  1760
Name:  ? Phvul.006G175200 Secondary Identifier:  ? PAC:37172679
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G175200 0.5kb upstream 0.5kb upstream 5082 true Chr06: 27803561-27808642 Phaseolus vulgaris
Phvul.006G175200 0.5kb upstream 0.5kb upstream 500 false Chr06: 27803561-27804060 Phaseolus vulgaris
Phvul.006G175200 0.5kb downstream 0.5kb downstream 5082 true Chr06: 27804061-27809142 Phaseolus vulgaris
Phvul.006G175200 0.5kb downstream 0.5kb downstream 500 false Chr06: 27808643-27809142 Phaseolus vulgaris
Phvul.006G175200 1.0kb upstream 1.0kb upstream 5582 true Chr06: 27803061-27808642 Phaseolus vulgaris
Phvul.006G175200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 27803061-27804060 Phaseolus vulgaris
Phvul.006G175200 1.0kb downstream 1.0kb downstream 5582 true Chr06: 27804061-27809642 Phaseolus vulgaris
Phvul.006G175200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 27808643-27809642 Phaseolus vulgaris
Phvul.006G175200 2.0kb upstream 2.0kb upstream 6582 true Chr06: 27802061-27808642 Phaseolus vulgaris
Phvul.006G175200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 27802061-27804060 Phaseolus vulgaris
Phvul.006G175200 2.0kb downstream 2.0kb downstream 6582 true Chr06: 27804061-27810642 Phaseolus vulgaris
Phvul.006G175200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 27808643-27810642 Phaseolus vulgaris
Phvul.006G175200 5.0kb upstream 5.0kb upstream 9582 true Chr06: 27799061-27808642 Phaseolus vulgaris
Phvul.006G175200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27799061-27804060 Phaseolus vulgaris
Phvul.006G175200 5.0kb downstream 5.0kb downstream 9582 true Chr06: 27804061-27813642 Phaseolus vulgaris
Phvul.006G175200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 27808643-27813642 Phaseolus vulgaris
Phvul.006G175200 10.0kb upstream 10.0kb upstream 14582 true Chr06: 27794061-27808642 Phaseolus vulgaris
Phvul.006G175200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27794061-27804060 Phaseolus vulgaris
Phvul.006G175200 10.0kb downstream 10.0kb downstream 14582 true Chr06: 27804061-27818642 Phaseolus vulgaris
Phvul.006G175200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 27808643-27818642 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303507 5265 Fabidae View MSA
124063936 5270 Rosid View MSA
123753384 5271 Pentapetalae View MSA
122796890 5272 Eudicot View MSA
122047636 5273 Angiosperm View MSA
121347589 5274 Embryophyte View MSA
123428464 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.8394 0.0 32.2086   High
cufflinks 7.25796 0.0 20.6681    
cufflinks 2.31295 0.0 7.44516   Low
cufflinks 7.565 0.0 21.6061   High
cufflinks 3.239 0.0 10.1759    
cufflinks 4.47831 0.0 13.4199    
cufflinks 3.2923 0.0 10.2657    
cufflinks 5.92993 0.0 17.1517    
cufflinks 2.26038 0.0 7.36982   Low
cufflinks 2.73659 0.0 8.7177    
cufflinks 3.59773 0.0 11.1601    

0 Strain