Gene : Phvul.006G173850 P. vulgaris v2.1
Genomic Order:  1746 Name:  ? Phvul.006G173850
Secondary Identifier:  ? PAC:37173219
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G173850 0.5kb upstream 0.5kb upstream 998 true Chr06: 27680601-27681598 Phaseolus vulgaris
Phvul.006G173850 0.5kb upstream 0.5kb upstream 500 false Chr06: 27681099-27681598 Phaseolus vulgaris
Phvul.006G173850 0.5kb downstream 0.5kb downstream 998 true Chr06: 27680101-27681098 Phaseolus vulgaris
Phvul.006G173850 0.5kb downstream 0.5kb downstream 500 false Chr06: 27680101-27680600 Phaseolus vulgaris
Phvul.006G173850 1.0kb upstream 1.0kb upstream 1498 true Chr06: 27680601-27682098 Phaseolus vulgaris
Phvul.006G173850 1.0kb upstream 1.0kb upstream 1000 false Chr06: 27681099-27682098 Phaseolus vulgaris
Phvul.006G173850 1.0kb downstream 1.0kb downstream 1498 true Chr06: 27679601-27681098 Phaseolus vulgaris
Phvul.006G173850 1.0kb downstream 1.0kb downstream 1000 false Chr06: 27679601-27680600 Phaseolus vulgaris
Phvul.006G173850 2.0kb upstream 2.0kb upstream 2498 true Chr06: 27680601-27683098 Phaseolus vulgaris
Phvul.006G173850 2.0kb upstream 2.0kb upstream 2000 false Chr06: 27681099-27683098 Phaseolus vulgaris
Phvul.006G173850 2.0kb downstream 2.0kb downstream 2498 true Chr06: 27678601-27681098 Phaseolus vulgaris
Phvul.006G173850 2.0kb downstream 2.0kb downstream 2000 false Chr06: 27678601-27680600 Phaseolus vulgaris
Phvul.006G173850 5.0kb upstream 5.0kb upstream 5498 true Chr06: 27680601-27686098 Phaseolus vulgaris
Phvul.006G173850 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27681099-27686098 Phaseolus vulgaris
Phvul.006G173850 5.0kb downstream 5.0kb downstream 5498 true Chr06: 27675601-27681098 Phaseolus vulgaris
Phvul.006G173850 5.0kb downstream 5.0kb downstream 5000 false Chr06: 27675601-27680600 Phaseolus vulgaris
Phvul.006G173850 10.0kb upstream 10.0kb upstream 10498 true Chr06: 27680601-27691098 Phaseolus vulgaris
Phvul.006G173850 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27681099-27691098 Phaseolus vulgaris
Phvul.006G173850 10.0kb downstream 10.0kb downstream 10498 true Chr06: 27670601-27681098 Phaseolus vulgaris
Phvul.006G173850 10.0kb downstream 10.0kb downstream 10000 false Chr06: 27670601-27680600 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310873 5265 Fabidae View MSA
124061036 5270 Rosid View MSA
123741474 5271 Pentapetalae View MSA
122787658 5272 Eudicot View MSA
122046165 5273 Angiosperm View MSA
121310567 5274 Embryophyte View MSA
123348018 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.09013 0.0 4.27927   Low
cufflinks 4.2738 0.0 14.9138    
cufflinks 4.02768 0.0 14.1622    
cufflinks 6.70314 0.0 22.117    
cufflinks 8.9145 0.0 28.9211    
cufflinks 4.02383 0.0 14.1379    
cufflinks 6.12159 0.0 20.4488    
cufflinks 1.57 0.0 5.98709   Low
cufflinks 8.21484 0.0 26.3864    
cufflinks 1.29203 0.0 5.02613   Low
cufflinks 10.2889 0.0 32.6   High

0 Strain