Gene : Phvul.006G177100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32285:SF15 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 37-RELATED Genomic Order:  1783
Name:  ? Phvul.006G177100 Secondary Identifier:  ? PAC:37173161
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G177100 0.5kb upstream 0.5kb upstream 5122 true Chr06: 28003223-28008344 Phaseolus vulgaris
Phvul.006G177100 0.5kb upstream 0.5kb upstream 500 false Chr06: 28003223-28003722 Phaseolus vulgaris
Phvul.006G177100 0.5kb downstream 0.5kb downstream 5122 true Chr06: 28003723-28008844 Phaseolus vulgaris
Phvul.006G177100 0.5kb downstream 0.5kb downstream 500 false Chr06: 28008345-28008844 Phaseolus vulgaris
Phvul.006G177100 1.0kb upstream 1.0kb upstream 5622 true Chr06: 28002723-28008344 Phaseolus vulgaris
Phvul.006G177100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 28002723-28003722 Phaseolus vulgaris
Phvul.006G177100 1.0kb downstream 1.0kb downstream 5622 true Chr06: 28003723-28009344 Phaseolus vulgaris
Phvul.006G177100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 28008345-28009344 Phaseolus vulgaris
Phvul.006G177100 2.0kb upstream 2.0kb upstream 6622 true Chr06: 28001723-28008344 Phaseolus vulgaris
Phvul.006G177100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 28001723-28003722 Phaseolus vulgaris
Phvul.006G177100 2.0kb downstream 2.0kb downstream 6622 true Chr06: 28003723-28010344 Phaseolus vulgaris
Phvul.006G177100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 28008345-28010344 Phaseolus vulgaris
Phvul.006G177100 5.0kb upstream 5.0kb upstream 9622 true Chr06: 27998723-28008344 Phaseolus vulgaris
Phvul.006G177100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27998723-28003722 Phaseolus vulgaris
Phvul.006G177100 5.0kb downstream 5.0kb downstream 9622 true Chr06: 28003723-28013344 Phaseolus vulgaris
Phvul.006G177100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 28008345-28013344 Phaseolus vulgaris
Phvul.006G177100 10.0kb upstream 10.0kb upstream 14622 true Chr06: 27993723-28008344 Phaseolus vulgaris
Phvul.006G177100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27993723-28003722 Phaseolus vulgaris
Phvul.006G177100 10.0kb downstream 10.0kb downstream 14622 true Chr06: 28003723-28018344 Phaseolus vulgaris
Phvul.006G177100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 28008345-28018344 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310732 5265 Fabidae View MSA
124064716 5270 Rosid View MSA
123736732 5271 Pentapetalae View MSA
122797510 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.3138 0.0 91.9385    
cufflinks 7.54027 0.0 24.4971   Low
cufflinks 38.5991 0.0 125.39 High  
cufflinks 15.0465 0.0 52.1929    
cufflinks 24.0288 0.0 69.673    
cufflinks 23.5328 0.0 76.0163    
cufflinks 15.9984 0.0 53.1427    
cufflinks 2.60771 0.0 10.777   Low
cufflinks 19.2579 0.0 56.8212    
cufflinks 35.7377 0.0 115.111    
cufflinks 23.5299 0.0 76.0031    

0 Strain