Gene : Phvul.006G176980 P. vulgaris v2.1
Defline:  (1 of 3) K02914 - large subunit ribosomal protein L34 (RP-L34, MRPL34, rpmH) Genomic Order:  1781
Name:  ? Phvul.006G176980 Secondary Identifier:  ? PAC:37173455
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G176980 0.5kb upstream 0.5kb upstream 2344 true Chr06: 27989873-27992216 Phaseolus vulgaris
Phvul.006G176980 0.5kb upstream 0.5kb upstream 500 false Chr06: 27989873-27990372 Phaseolus vulgaris
Phvul.006G176980 0.5kb downstream 0.5kb downstream 2344 true Chr06: 27990373-27992716 Phaseolus vulgaris
Phvul.006G176980 0.5kb downstream 0.5kb downstream 500 false Chr06: 27992217-27992716 Phaseolus vulgaris
Phvul.006G176980 1.0kb upstream 1.0kb upstream 2844 true Chr06: 27989373-27992216 Phaseolus vulgaris
Phvul.006G176980 1.0kb upstream 1.0kb upstream 1000 false Chr06: 27989373-27990372 Phaseolus vulgaris
Phvul.006G176980 1.0kb downstream 1.0kb downstream 2844 true Chr06: 27990373-27993216 Phaseolus vulgaris
Phvul.006G176980 1.0kb downstream 1.0kb downstream 1000 false Chr06: 27992217-27993216 Phaseolus vulgaris
Phvul.006G176980 2.0kb upstream 2.0kb upstream 3844 true Chr06: 27988373-27992216 Phaseolus vulgaris
Phvul.006G176980 2.0kb upstream 2.0kb upstream 2000 false Chr06: 27988373-27990372 Phaseolus vulgaris
Phvul.006G176980 2.0kb downstream 2.0kb downstream 3844 true Chr06: 27990373-27994216 Phaseolus vulgaris
Phvul.006G176980 2.0kb downstream 2.0kb downstream 2000 false Chr06: 27992217-27994216 Phaseolus vulgaris
Phvul.006G176980 5.0kb upstream 5.0kb upstream 6844 true Chr06: 27985373-27992216 Phaseolus vulgaris
Phvul.006G176980 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27985373-27990372 Phaseolus vulgaris
Phvul.006G176980 5.0kb downstream 5.0kb downstream 6844 true Chr06: 27990373-27997216 Phaseolus vulgaris
Phvul.006G176980 5.0kb downstream 5.0kb downstream 5000 false Chr06: 27992217-27997216 Phaseolus vulgaris
Phvul.006G176980 10.0kb upstream 10.0kb upstream 11844 true Chr06: 27980373-27992216 Phaseolus vulgaris
Phvul.006G176980 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27980373-27990372 Phaseolus vulgaris
Phvul.006G176980 10.0kb downstream 10.0kb downstream 11844 true Chr06: 27990373-28002216 Phaseolus vulgaris
Phvul.006G176980 10.0kb downstream 10.0kb downstream 10000 false Chr06: 27992217-28002216 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301993 5265 Fabidae View MSA
124063113 5270 Rosid View MSA
123739506 5271 Pentapetalae View MSA
122792806 5272 Eudicot View MSA
122044582 5273 Angiosperm View MSA
121344313 5274 Embryophyte View MSA
123425891 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.8438 0.0 95.5558 High  
cufflinks 51.0501 0.0 133.296 High  
cufflinks 171.913 0.0 455.425 High High
cufflinks 38.2292 0.0 101.27 High  
cufflinks 35.1953 0.0 94.2893 High  
cufflinks 142.917 0.0 374.829 High High
cufflinks 5.25998 0.0 17.0133   Low
cufflinks 8.80101 0.0 26.94   Low
cufflinks 5.81167 0.0 18.5878   Low
cufflinks 20.3013 0.0 57.0955    
cufflinks 26.6259 0.0 72.7821    

0 Strain