Gene : Phvul.006G177600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR18968//PTHR18968:SF132 - THIAMINE PYROPHOSPHATE ENZYMES // SUBFAMILY NOT NAMED Genomic Order:  1788
Name:  ? Phvul.006G177600 Secondary Identifier:  ? PAC:37172133
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5486 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6330 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G177600 0.5kb upstream 0.5kb upstream 5038 true Chr06: 28037110-28042147 Phaseolus vulgaris
Phvul.006G177600 0.5kb upstream 0.5kb upstream 500 false Chr06: 28041648-28042147 Phaseolus vulgaris
Phvul.006G177600 0.5kb downstream 0.5kb downstream 5038 true Chr06: 28036610-28041647 Phaseolus vulgaris
Phvul.006G177600 0.5kb downstream 0.5kb downstream 500 false Chr06: 28036610-28037109 Phaseolus vulgaris
Phvul.006G177600 1.0kb upstream 1.0kb upstream 5538 true Chr06: 28037110-28042647 Phaseolus vulgaris
Phvul.006G177600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 28041648-28042647 Phaseolus vulgaris
Phvul.006G177600 1.0kb downstream 1.0kb downstream 5538 true Chr06: 28036110-28041647 Phaseolus vulgaris
Phvul.006G177600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 28036110-28037109 Phaseolus vulgaris
Phvul.006G177600 2.0kb upstream 2.0kb upstream 6538 true Chr06: 28037110-28043647 Phaseolus vulgaris
Phvul.006G177600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 28041648-28043647 Phaseolus vulgaris
Phvul.006G177600 2.0kb downstream 2.0kb downstream 6538 true Chr06: 28035110-28041647 Phaseolus vulgaris
Phvul.006G177600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 28035110-28037109 Phaseolus vulgaris
Phvul.006G177600 5.0kb upstream 5.0kb upstream 9538 true Chr06: 28037110-28046647 Phaseolus vulgaris
Phvul.006G177600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 28041648-28046647 Phaseolus vulgaris
Phvul.006G177600 5.0kb downstream 5.0kb downstream 9538 true Chr06: 28032110-28041647 Phaseolus vulgaris
Phvul.006G177600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 28032110-28037109 Phaseolus vulgaris
Phvul.006G177600 10.0kb upstream 10.0kb upstream 14538 true Chr06: 28037110-28051647 Phaseolus vulgaris
Phvul.006G177600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 28041648-28051647 Phaseolus vulgaris
Phvul.006G177600 10.0kb downstream 10.0kb downstream 14538 true Chr06: 28027110-28041647 Phaseolus vulgaris
Phvul.006G177600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 28027110-28037109 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791820 5273 Angiosperm View MSA
122302892 5265 Fabidae View MSA
124070519 5270 Rosid View MSA
123742600 5271 Pentapetalae View MSA
122794163 5272 Eudicot View MSA
121351042 5274 Embryophyte View MSA
123426958 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3401 0.0 29.6007   Low
cufflinks 17.7583 0.0 45.9041    
cufflinks 11.3317 0.0 29.6409   Low
cufflinks 14.1321 0.0 36.6368    
cufflinks 41.2859 0.0 110.03 High  
cufflinks 8.80839 0.0 23.3593   Low
cufflinks 63.2775 0.0 175.926 High High
cufflinks 63.4109 0.0 176.045 High High
cufflinks 67.6352 0.0 189.29 High High
cufflinks 26.6814 0.0 69.4382    
cufflinks 34.1007 0.0 89.7538 High  

0 Strain