Gene : Phvul.009G075000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10641:SF519 - TRANSCRIPTION FACTOR RAX2 Genomic Order:  772
Name:  ? Phvul.009G075000 Secondary Identifier:  ? PAC:37151866
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G075000 0.5kb upstream 0.5kb upstream 2308 true Chr09: 12777555-12779862 Phaseolus vulgaris
Phvul.009G075000 0.5kb upstream 0.5kb upstream 500 false Chr09: 12779363-12779862 Phaseolus vulgaris
Phvul.009G075000 0.5kb downstream 0.5kb downstream 2308 true Chr09: 12777055-12779362 Phaseolus vulgaris
Phvul.009G075000 0.5kb downstream 0.5kb downstream 500 false Chr09: 12777055-12777554 Phaseolus vulgaris
Phvul.009G075000 1.0kb upstream 1.0kb upstream 2808 true Chr09: 12777555-12780362 Phaseolus vulgaris
Phvul.009G075000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 12779363-12780362 Phaseolus vulgaris
Phvul.009G075000 1.0kb downstream 1.0kb downstream 2808 true Chr09: 12776555-12779362 Phaseolus vulgaris
Phvul.009G075000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 12776555-12777554 Phaseolus vulgaris
Phvul.009G075000 2.0kb upstream 2.0kb upstream 3808 true Chr09: 12777555-12781362 Phaseolus vulgaris
Phvul.009G075000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 12779363-12781362 Phaseolus vulgaris
Phvul.009G075000 2.0kb downstream 2.0kb downstream 3808 true Chr09: 12775555-12779362 Phaseolus vulgaris
Phvul.009G075000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 12775555-12777554 Phaseolus vulgaris
Phvul.009G075000 5.0kb upstream 5.0kb upstream 6808 true Chr09: 12777555-12784362 Phaseolus vulgaris
Phvul.009G075000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 12779363-12784362 Phaseolus vulgaris
Phvul.009G075000 5.0kb downstream 5.0kb downstream 6808 true Chr09: 12772555-12779362 Phaseolus vulgaris
Phvul.009G075000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 12772555-12777554 Phaseolus vulgaris
Phvul.009G075000 10.0kb upstream 10.0kb upstream 11808 true Chr09: 12777555-12789362 Phaseolus vulgaris
Phvul.009G075000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 12779363-12789362 Phaseolus vulgaris
Phvul.009G075000 10.0kb downstream 10.0kb downstream 11808 true Chr09: 12767555-12779362 Phaseolus vulgaris
Phvul.009G075000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 12767555-12777554 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311579 5265 Fabidae View MSA
124071714 5270 Rosid View MSA
123746695 5271 Pentapetalae View MSA
122790538 5272 Eudicot View MSA
122047860 5273 Angiosperm View MSA
121310809 5274 Embryophyte View MSA
123348206 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.114763 0.0 0.483562 Low  
cufflinks 0.276701 0.0 1.08528 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.536683 0.0 2.01195 Low  
cufflinks 0.0869493 0.0 0.375179 Low  
cufflinks 7.64252 0.0 21.3671   High
cufflinks 2.89987 0.0 8.99903    
cufflinks 11.8724 0.0 31.968   High
cufflinks 0.0246964 0.0 0.121902 Low Low
cufflinks 0.259179 0.0 1.02501 Low  

0 Strain