Gene : Phvul.006G176100 P. vulgaris v2.1
Defline:  (1 of 16) PF04852 - Protein of unknown function (DUF640) (DUF640) Genomic Order:  1770
Name:  ? Phvul.006G176100 Secondary Identifier:  ? PAC:37171606
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G176100 0.5kb upstream 0.5kb upstream 6550 true Chr06: 27880732-27887281 Phaseolus vulgaris
Phvul.006G176100 0.5kb upstream 0.5kb upstream 500 false Chr06: 27886782-27887281 Phaseolus vulgaris
Phvul.006G176100 0.5kb downstream 0.5kb downstream 6550 true Chr06: 27880232-27886781 Phaseolus vulgaris
Phvul.006G176100 0.5kb downstream 0.5kb downstream 500 false Chr06: 27880232-27880731 Phaseolus vulgaris
Phvul.006G176100 1.0kb upstream 1.0kb upstream 7050 true Chr06: 27880732-27887781 Phaseolus vulgaris
Phvul.006G176100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 27886782-27887781 Phaseolus vulgaris
Phvul.006G176100 1.0kb downstream 1.0kb downstream 7050 true Chr06: 27879732-27886781 Phaseolus vulgaris
Phvul.006G176100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 27879732-27880731 Phaseolus vulgaris
Phvul.006G176100 2.0kb upstream 2.0kb upstream 8050 true Chr06: 27880732-27888781 Phaseolus vulgaris
Phvul.006G176100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 27886782-27888781 Phaseolus vulgaris
Phvul.006G176100 2.0kb downstream 2.0kb downstream 8050 true Chr06: 27878732-27886781 Phaseolus vulgaris
Phvul.006G176100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 27878732-27880731 Phaseolus vulgaris
Phvul.006G176100 5.0kb upstream 5.0kb upstream 11050 true Chr06: 27880732-27891781 Phaseolus vulgaris
Phvul.006G176100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27886782-27891781 Phaseolus vulgaris
Phvul.006G176100 5.0kb downstream 5.0kb downstream 11050 true Chr06: 27875732-27886781 Phaseolus vulgaris
Phvul.006G176100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 27875732-27880731 Phaseolus vulgaris
Phvul.006G176100 10.0kb upstream 10.0kb upstream 16050 true Chr06: 27880732-27896781 Phaseolus vulgaris
Phvul.006G176100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27886782-27896781 Phaseolus vulgaris
Phvul.006G176100 10.0kb downstream 10.0kb downstream 16050 true Chr06: 27870732-27886781 Phaseolus vulgaris
Phvul.006G176100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 27870732-27880731 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792183 5273 Angiosperm View MSA
122304209 5265 Fabidae View MSA
124074351 5270 Rosid View MSA
123750207 5271 Pentapetalae View MSA
122796804 5272 Eudicot View MSA
121063429 5274 Embryophyte View MSA
123103178 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.0069 0.0 28.3856    
cufflinks 44.2761 0.0 114.471 High  
cufflinks 3.11138 0.0 10.1014   Low
cufflinks 7.88048 0.0 22.7533    
cufflinks 72.9366 0.0 190.806 High High
cufflinks 2.65444 0.0 8.75476   Low
cufflinks 25.8001 0.0 67.4715    
cufflinks 7.54524 0.0 22.0438    
cufflinks 9.04139 0.0 25.6928    
cufflinks 61.5524 0.0 159.607 High High
cufflinks 72.0591 0.0 188.238 High High

0 Strain