Gene : Phvul.009G077000 P. vulgaris v2.1
Defline:  (1 of 4) PTHR11034:SF23 - N-MYC DOWNREGULATED-LIKE 3 PROTEIN Genomic Order:  792
Name:  ? Phvul.009G077000 Secondary Identifier:  ? PAC:37151233
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G077000 0.5kb upstream 0.5kb upstream 5377 true Chr09: 12995752-13001128 Phaseolus vulgaris
Phvul.009G077000 0.5kb upstream 0.5kb upstream 500 false Chr09: 12995752-12996251 Phaseolus vulgaris
Phvul.009G077000 0.5kb downstream 0.5kb downstream 5377 true Chr09: 12996252-13001628 Phaseolus vulgaris
Phvul.009G077000 0.5kb downstream 0.5kb downstream 500 false Chr09: 13001129-13001628 Phaseolus vulgaris
Phvul.009G077000 1.0kb upstream 1.0kb upstream 5877 true Chr09: 12995252-13001128 Phaseolus vulgaris
Phvul.009G077000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 12995252-12996251 Phaseolus vulgaris
Phvul.009G077000 1.0kb downstream 1.0kb downstream 5877 true Chr09: 12996252-13002128 Phaseolus vulgaris
Phvul.009G077000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 13001129-13002128 Phaseolus vulgaris
Phvul.009G077000 2.0kb upstream 2.0kb upstream 6877 true Chr09: 12994252-13001128 Phaseolus vulgaris
Phvul.009G077000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 12994252-12996251 Phaseolus vulgaris
Phvul.009G077000 2.0kb downstream 2.0kb downstream 6877 true Chr09: 12996252-13003128 Phaseolus vulgaris
Phvul.009G077000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 13001129-13003128 Phaseolus vulgaris
Phvul.009G077000 5.0kb upstream 5.0kb upstream 9877 true Chr09: 12991252-13001128 Phaseolus vulgaris
Phvul.009G077000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 12991252-12996251 Phaseolus vulgaris
Phvul.009G077000 5.0kb downstream 5.0kb downstream 9877 true Chr09: 12996252-13006128 Phaseolus vulgaris
Phvul.009G077000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 13001129-13006128 Phaseolus vulgaris
Phvul.009G077000 10.0kb upstream 10.0kb upstream 14877 true Chr09: 12986252-13001128 Phaseolus vulgaris
Phvul.009G077000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 12986252-12996251 Phaseolus vulgaris
Phvul.009G077000 10.0kb downstream 10.0kb downstream 14877 true Chr09: 12996252-13011128 Phaseolus vulgaris
Phvul.009G077000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 13001129-13011128 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310930 5265 Fabidae View MSA
124071063 5270 Rosid View MSA
123743242 5271 Pentapetalae View MSA
122795895 5272 Eudicot View MSA
122051433 5273 Angiosperm View MSA
121349062 5274 Embryophyte View MSA
123381146 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.16158 0.0 9.62528   Low
cufflinks 17.3784 0.0 45.3672    
cufflinks 13.8778 0.0 36.647    
cufflinks 22.9282 0.0 59.4774   High
cufflinks 11.4444 0.0 30.8006    
cufflinks 11.262 0.0 30.2109    
cufflinks 17.9169 0.0 46.7047    
cufflinks 11.3456 0.0 30.311    
cufflinks 8.75045 0.0 24.0458    
cufflinks 26.863 0.0 69.4395   High
cufflinks 13.6335 0.0 36.1611    

0 Strain