Gene : Phvul.006G178100 P. vulgaris v2.1
Defline:  (1 of 1) K13176 - THO complex subunit 7 (THOC7) Genomic Order:  1793
Name:  ? Phvul.006G178100 Secondary Identifier:  ? PAC:37172867
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G178100 0.5kb upstream 0.5kb upstream 3754 true Chr06: 28063168-28066921 Phaseolus vulgaris
Phvul.006G178100 0.5kb upstream 0.5kb upstream 500 false Chr06: 28066422-28066921 Phaseolus vulgaris
Phvul.006G178100 0.5kb downstream 0.5kb downstream 3754 true Chr06: 28062668-28066421 Phaseolus vulgaris
Phvul.006G178100 0.5kb downstream 0.5kb downstream 500 false Chr06: 28062668-28063167 Phaseolus vulgaris
Phvul.006G178100 1.0kb upstream 1.0kb upstream 4254 true Chr06: 28063168-28067421 Phaseolus vulgaris
Phvul.006G178100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 28066422-28067421 Phaseolus vulgaris
Phvul.006G178100 1.0kb downstream 1.0kb downstream 4254 true Chr06: 28062168-28066421 Phaseolus vulgaris
Phvul.006G178100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 28062168-28063167 Phaseolus vulgaris
Phvul.006G178100 2.0kb upstream 2.0kb upstream 5254 true Chr06: 28063168-28068421 Phaseolus vulgaris
Phvul.006G178100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 28066422-28068421 Phaseolus vulgaris
Phvul.006G178100 2.0kb downstream 2.0kb downstream 5254 true Chr06: 28061168-28066421 Phaseolus vulgaris
Phvul.006G178100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 28061168-28063167 Phaseolus vulgaris
Phvul.006G178100 5.0kb upstream 5.0kb upstream 8254 true Chr06: 28063168-28071421 Phaseolus vulgaris
Phvul.006G178100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 28066422-28071421 Phaseolus vulgaris
Phvul.006G178100 5.0kb downstream 5.0kb downstream 8254 true Chr06: 28058168-28066421 Phaseolus vulgaris
Phvul.006G178100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 28058168-28063167 Phaseolus vulgaris
Phvul.006G178100 10.0kb upstream 10.0kb upstream 13254 true Chr06: 28063168-28076421 Phaseolus vulgaris
Phvul.006G178100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 28066422-28076421 Phaseolus vulgaris
Phvul.006G178100 10.0kb downstream 10.0kb downstream 13254 true Chr06: 28053168-28066421 Phaseolus vulgaris
Phvul.006G178100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 28053168-28063167 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307568 5265 Fabidae View MSA
124069110 5270 Rosid View MSA
123737920 5271 Pentapetalae View MSA
122791766 5272 Eudicot View MSA
122047726 5273 Angiosperm View MSA
121351339 5274 Embryophyte View MSA
123428544 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.6495 0.0 63.8894    
cufflinks 25.1582 0.0 65.1488    
cufflinks 18.8244 0.0 49.3699   Low
cufflinks 27.639 0.0 71.4929   High
cufflinks 24.9345 0.0 64.6574    
cufflinks 17.1174 0.0 44.9693   Low
cufflinks 21.5794 0.0 55.9919    
cufflinks 22.2922 0.0 57.9517    
cufflinks 23.7897 0.0 61.5599    
cufflinks 23.5472 0.0 61.1275    
cufflinks 27.859 0.0 72.0245   High

0 Strain