Gene : Phvul.009G079400 P. vulgaris v2.1
Defline:  (1 of 1) K17968 - TRIAP1/MDM35 family protein (TRIAP1, MDM35) Genomic Order:  815
Name:  ? Phvul.009G079400 Secondary Identifier:  ? PAC:37148773
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G079400 0.5kb upstream 0.5kb upstream 3756 true Chr09: 13253591-13257346 Phaseolus vulgaris
Phvul.009G079400 0.5kb upstream 0.5kb upstream 500 false Chr09: 13256847-13257346 Phaseolus vulgaris
Phvul.009G079400 0.5kb downstream 0.5kb downstream 3756 true Chr09: 13253091-13256846 Phaseolus vulgaris
Phvul.009G079400 0.5kb downstream 0.5kb downstream 500 false Chr09: 13253091-13253590 Phaseolus vulgaris
Phvul.009G079400 1.0kb upstream 1.0kb upstream 4256 true Chr09: 13253591-13257846 Phaseolus vulgaris
Phvul.009G079400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 13256847-13257846 Phaseolus vulgaris
Phvul.009G079400 1.0kb downstream 1.0kb downstream 4256 true Chr09: 13252591-13256846 Phaseolus vulgaris
Phvul.009G079400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 13252591-13253590 Phaseolus vulgaris
Phvul.009G079400 2.0kb upstream 2.0kb upstream 5256 true Chr09: 13253591-13258846 Phaseolus vulgaris
Phvul.009G079400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 13256847-13258846 Phaseolus vulgaris
Phvul.009G079400 2.0kb downstream 2.0kb downstream 5256 true Chr09: 13251591-13256846 Phaseolus vulgaris
Phvul.009G079400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 13251591-13253590 Phaseolus vulgaris
Phvul.009G079400 5.0kb upstream 5.0kb upstream 8256 true Chr09: 13253591-13261846 Phaseolus vulgaris
Phvul.009G079400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 13256847-13261846 Phaseolus vulgaris
Phvul.009G079400 5.0kb downstream 5.0kb downstream 8256 true Chr09: 13248591-13256846 Phaseolus vulgaris
Phvul.009G079400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 13248591-13253590 Phaseolus vulgaris
Phvul.009G079400 10.0kb upstream 10.0kb upstream 13256 true Chr09: 13253591-13266846 Phaseolus vulgaris
Phvul.009G079400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 13256847-13266846 Phaseolus vulgaris
Phvul.009G079400 10.0kb downstream 10.0kb downstream 13256 true Chr09: 13243591-13256846 Phaseolus vulgaris
Phvul.009G079400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 13243591-13253590 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310414 5265 Fabidae View MSA
124065636 5270 Rosid View MSA
123737457 5271 Pentapetalae View MSA
122786925 5272 Eudicot View MSA
122043759 5273 Angiosperm View MSA
121347036 5274 Embryophyte View MSA
123380483 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.15667 0.0 29.6927    
cufflinks 7.56659 0.0 34.3449    
cufflinks 7.21415 0.0 38.9668    
cufflinks 9.24926 0.0 37.7725   High
cufflinks 7.22511 0.0 39.0796    
cufflinks 7.54108 0.0 37.9385    
cufflinks 6.91875 0.0 36.3959    
cufflinks 8.5779 0.0 42.7731   High
cufflinks 5.44703 0.0 32.0965   Low
cufflinks 4.58537 0.0 28.6805   Low
cufflinks 6.32821 0.0 32.764    

0 Strain