Gene : Phvul.009G079500 P. vulgaris v2.1
Defline:  (1 of 1) K08776 - puromycin-sensitive aminopeptidase [EC:3.4.11.-] (NPEPPS) Genomic Order:  816
Name:  ? Phvul.009G079500 Secondary Identifier:  ? PAC:37150903
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6842 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G079500 0.5kb upstream 0.5kb upstream 7919 true Chr09: 13257469-13265387 Phaseolus vulgaris
Phvul.009G079500 0.5kb upstream 0.5kb upstream 500 false Chr09: 13257469-13257968 Phaseolus vulgaris
Phvul.009G079500 0.5kb downstream 0.5kb downstream 7919 true Chr09: 13257969-13265887 Phaseolus vulgaris
Phvul.009G079500 0.5kb downstream 0.5kb downstream 500 false Chr09: 13265388-13265887 Phaseolus vulgaris
Phvul.009G079500 1.0kb upstream 1.0kb upstream 8419 true Chr09: 13256969-13265387 Phaseolus vulgaris
Phvul.009G079500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 13256969-13257968 Phaseolus vulgaris
Phvul.009G079500 1.0kb downstream 1.0kb downstream 8419 true Chr09: 13257969-13266387 Phaseolus vulgaris
Phvul.009G079500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 13265388-13266387 Phaseolus vulgaris
Phvul.009G079500 2.0kb upstream 2.0kb upstream 9419 true Chr09: 13255969-13265387 Phaseolus vulgaris
Phvul.009G079500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 13255969-13257968 Phaseolus vulgaris
Phvul.009G079500 2.0kb downstream 2.0kb downstream 9419 true Chr09: 13257969-13267387 Phaseolus vulgaris
Phvul.009G079500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 13265388-13267387 Phaseolus vulgaris
Phvul.009G079500 5.0kb upstream 5.0kb upstream 12419 true Chr09: 13252969-13265387 Phaseolus vulgaris
Phvul.009G079500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 13252969-13257968 Phaseolus vulgaris
Phvul.009G079500 5.0kb downstream 5.0kb downstream 12419 true Chr09: 13257969-13270387 Phaseolus vulgaris
Phvul.009G079500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 13265388-13270387 Phaseolus vulgaris
Phvul.009G079500 10.0kb upstream 10.0kb upstream 17419 true Chr09: 13247969-13265387 Phaseolus vulgaris
Phvul.009G079500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 13247969-13257968 Phaseolus vulgaris
Phvul.009G079500 10.0kb downstream 10.0kb downstream 17419 true Chr09: 13257969-13275387 Phaseolus vulgaris
Phvul.009G079500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 13265388-13275387 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307683 5265 Fabidae View MSA
124064231 5270 Rosid View MSA
123745445 5271 Pentapetalae View MSA
122791441 5272 Eudicot View MSA
122045992 5273 Angiosperm View MSA
121349880 5274 Embryophyte View MSA
123428340 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.2436 0.0 60.5276   Low
cufflinks 31.3769 0.0 82.9519    
cufflinks 30.4847 0.0 80.4881    
cufflinks 28.0761 0.0 73.5178    
cufflinks 30.1069 0.0 79.1686    
cufflinks 30.1321 0.0 79.416    
cufflinks 34.2254 0.0 90.9847 High  
cufflinks 29.9385 0.0 78.9937 High  
cufflinks 49.9156 0.0 136.836 High High
cufflinks 44.1541 0.0 119.934 High High
cufflinks 28.3758 0.0 74.402    

0 Strain