Gene : Phvul.006G180700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33873:SF1 - TRANSCRIPTION FACTOR VOZ1 Genomic Order:  1820
Name:  ? Phvul.006G180700 Secondary Identifier:  ? PAC:37172309
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G180700 0.5kb upstream 0.5kb upstream 4162 true Chr06: 28241006-28245167 Phaseolus vulgaris
Phvul.006G180700 0.5kb upstream 0.5kb upstream 500 false Chr06: 28244668-28245167 Phaseolus vulgaris
Phvul.006G180700 0.5kb downstream 0.5kb downstream 4162 true Chr06: 28240506-28244667 Phaseolus vulgaris
Phvul.006G180700 0.5kb downstream 0.5kb downstream 500 false Chr06: 28240506-28241005 Phaseolus vulgaris
Phvul.006G180700 1.0kb upstream 1.0kb upstream 4662 true Chr06: 28241006-28245667 Phaseolus vulgaris
Phvul.006G180700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 28244668-28245667 Phaseolus vulgaris
Phvul.006G180700 1.0kb downstream 1.0kb downstream 4662 true Chr06: 28240006-28244667 Phaseolus vulgaris
Phvul.006G180700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 28240006-28241005 Phaseolus vulgaris
Phvul.006G180700 2.0kb upstream 2.0kb upstream 5662 true Chr06: 28241006-28246667 Phaseolus vulgaris
Phvul.006G180700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 28244668-28246667 Phaseolus vulgaris
Phvul.006G180700 2.0kb downstream 2.0kb downstream 5662 true Chr06: 28239006-28244667 Phaseolus vulgaris
Phvul.006G180700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 28239006-28241005 Phaseolus vulgaris
Phvul.006G180700 5.0kb upstream 5.0kb upstream 8662 true Chr06: 28241006-28249667 Phaseolus vulgaris
Phvul.006G180700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 28244668-28249667 Phaseolus vulgaris
Phvul.006G180700 5.0kb downstream 5.0kb downstream 8662 true Chr06: 28236006-28244667 Phaseolus vulgaris
Phvul.006G180700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 28236006-28241005 Phaseolus vulgaris
Phvul.006G180700 10.0kb upstream 10.0kb upstream 13662 true Chr06: 28241006-28254667 Phaseolus vulgaris
Phvul.006G180700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 28244668-28254667 Phaseolus vulgaris
Phvul.006G180700 10.0kb downstream 10.0kb downstream 13662 true Chr06: 28231006-28244667 Phaseolus vulgaris
Phvul.006G180700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 28231006-28241005 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253560 5265 Fabidae View MSA
123996107 5270 Rosid View MSA
123570640 5271 Pentapetalae View MSA
122605376 5272 Eudicot View MSA
122043421 5273 Angiosperm View MSA
121348934 5274 Embryophyte View MSA
123381085 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.53272 0.0 22.8084    
cufflinks 4.39847 0.0 12.4515    
cufflinks 10.1372 0.0 26.7322    
cufflinks 14.956 0.0 38.898   High
cufflinks 7.14746 0.0 19.4867    
cufflinks 7.83204 0.0 21.048    
cufflinks 3.01553 0.0 8.87397   Low
cufflinks 1.98589 0.0 6.11552   Low
cufflinks 2.80176 0.0 8.33773   Low
cufflinks 7.09839 0.0 19.2846    
cufflinks 9.2647 0.0 24.7112    

0 Strain