Gene : Phvul.009G078000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24089:SF342 - PROTEIN R07E3.4 Genomic Order:  802
Name:  ? Phvul.009G078000 Secondary Identifier:  ? PAC:37149457
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G078000 0.5kb upstream 0.5kb upstream 6454 true Chr09: 13102299-13108752 Phaseolus vulgaris
Phvul.009G078000 0.5kb upstream 0.5kb upstream 500 false Chr09: 13102299-13102798 Phaseolus vulgaris
Phvul.009G078000 0.5kb downstream 0.5kb downstream 6454 true Chr09: 13102799-13109252 Phaseolus vulgaris
Phvul.009G078000 0.5kb downstream 0.5kb downstream 500 false Chr09: 13108753-13109252 Phaseolus vulgaris
Phvul.009G078000 1.0kb upstream 1.0kb upstream 6954 true Chr09: 13101799-13108752 Phaseolus vulgaris
Phvul.009G078000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 13101799-13102798 Phaseolus vulgaris
Phvul.009G078000 1.0kb downstream 1.0kb downstream 6954 true Chr09: 13102799-13109752 Phaseolus vulgaris
Phvul.009G078000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 13108753-13109752 Phaseolus vulgaris
Phvul.009G078000 2.0kb upstream 2.0kb upstream 7954 true Chr09: 13100799-13108752 Phaseolus vulgaris
Phvul.009G078000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 13100799-13102798 Phaseolus vulgaris
Phvul.009G078000 2.0kb downstream 2.0kb downstream 7954 true Chr09: 13102799-13110752 Phaseolus vulgaris
Phvul.009G078000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 13108753-13110752 Phaseolus vulgaris
Phvul.009G078000 5.0kb upstream 5.0kb upstream 10954 true Chr09: 13097799-13108752 Phaseolus vulgaris
Phvul.009G078000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 13097799-13102798 Phaseolus vulgaris
Phvul.009G078000 5.0kb downstream 5.0kb downstream 10954 true Chr09: 13102799-13113752 Phaseolus vulgaris
Phvul.009G078000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 13108753-13113752 Phaseolus vulgaris
Phvul.009G078000 10.0kb upstream 10.0kb upstream 15954 true Chr09: 13092799-13108752 Phaseolus vulgaris
Phvul.009G078000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 13092799-13102798 Phaseolus vulgaris
Phvul.009G078000 10.0kb downstream 10.0kb downstream 15954 true Chr09: 13102799-13118752 Phaseolus vulgaris
Phvul.009G078000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 13108753-13118752 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307012 5265 Fabidae View MSA
124065765 5270 Rosid View MSA
123737630 5271 Pentapetalae View MSA
122792945 5272 Eudicot View MSA
122042720 5273 Angiosperm View MSA
121346256 5274 Embryophyte View MSA
123427851 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.40454 0.0 15.1307    
cufflinks 5.74688 0.0 16.0221    
cufflinks 5.51994 0.0 15.4786    
cufflinks 7.67721 0.0 20.993   High
cufflinks 5.33386 0.0 15.0406    
cufflinks 4.60761 0.0 13.117    
cufflinks 3.45471 0.0 10.1132   Low
cufflinks 3.37151 0.0 9.8873   Low
cufflinks 3.7262 0.0 10.8294   Low
cufflinks 5.79958 0.0 16.165    
cufflinks 4.91545 0.0 13.9239    

0 Strain