Gene : Phvul.006G181000 P. vulgaris v2.1
Defline:  (1 of 2) K01724 - 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] (PCBD, phhB) Genomic Order:  1823
Name:  ? Phvul.006G181000 Secondary Identifier:  ? PAC:37172960
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G181000 0.5kb upstream 0.5kb upstream 4703 true Chr06: 28253649-28258351 Phaseolus vulgaris
Phvul.006G181000 0.5kb upstream 0.5kb upstream 500 false Chr06: 28253649-28254148 Phaseolus vulgaris
Phvul.006G181000 0.5kb downstream 0.5kb downstream 4703 true Chr06: 28254149-28258851 Phaseolus vulgaris
Phvul.006G181000 0.5kb downstream 0.5kb downstream 500 false Chr06: 28258352-28258851 Phaseolus vulgaris
Phvul.006G181000 1.0kb upstream 1.0kb upstream 5203 true Chr06: 28253149-28258351 Phaseolus vulgaris
Phvul.006G181000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 28253149-28254148 Phaseolus vulgaris
Phvul.006G181000 1.0kb downstream 1.0kb downstream 5203 true Chr06: 28254149-28259351 Phaseolus vulgaris
Phvul.006G181000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 28258352-28259351 Phaseolus vulgaris
Phvul.006G181000 2.0kb upstream 2.0kb upstream 6203 true Chr06: 28252149-28258351 Phaseolus vulgaris
Phvul.006G181000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 28252149-28254148 Phaseolus vulgaris
Phvul.006G181000 2.0kb downstream 2.0kb downstream 6203 true Chr06: 28254149-28260351 Phaseolus vulgaris
Phvul.006G181000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 28258352-28260351 Phaseolus vulgaris
Phvul.006G181000 5.0kb upstream 5.0kb upstream 9203 true Chr06: 28249149-28258351 Phaseolus vulgaris
Phvul.006G181000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 28249149-28254148 Phaseolus vulgaris
Phvul.006G181000 5.0kb downstream 5.0kb downstream 9203 true Chr06: 28254149-28263351 Phaseolus vulgaris
Phvul.006G181000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 28258352-28263351 Phaseolus vulgaris
Phvul.006G181000 10.0kb upstream 10.0kb upstream 14203 true Chr06: 28244149-28258351 Phaseolus vulgaris
Phvul.006G181000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 28244149-28254148 Phaseolus vulgaris
Phvul.006G181000 10.0kb downstream 10.0kb downstream 14203 true Chr06: 28254149-28268351 Phaseolus vulgaris
Phvul.006G181000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 28258352-28268351 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310533 5265 Fabidae View MSA
124068632 5270 Rosid View MSA
123742816 5271 Pentapetalae View MSA
122797926 5272 Eudicot View MSA
122046446 5273 Angiosperm View MSA
121348467 5274 Embryophyte View MSA
123427509 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.9477 0.0 41.5844   High
cufflinks 13.7544 0.0 38.7079   High
cufflinks 7.60167 0.0 22.6782    
cufflinks 18.7662 0.0 51.5629   High
cufflinks 6.17383 0.0 19.084    
cufflinks 6.6248 0.0 20.1373    
cufflinks 4.39198 0.0 14.0604   Low
cufflinks 7.09043 0.0 21.3417    
cufflinks 5.88631 0.0 18.2701    
cufflinks 9.0383 0.0 26.5581    
cufflinks 7.19479 0.0 21.8628    

0 Strain