Gene : Phvul.009G078900 P. vulgaris v2.1
Defline:  (1 of 11) KOG2922 - Uncharacterized conserved protein Genomic Order:  810
Name:  ? Phvul.009G078900 Secondary Identifier:  ? PAC:37150831
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G078900 0.5kb upstream 0.5kb upstream 4288 true Chr09: 13198405-13202692 Phaseolus vulgaris
Phvul.009G078900 0.5kb upstream 0.5kb upstream 500 false Chr09: 13202193-13202692 Phaseolus vulgaris
Phvul.009G078900 0.5kb downstream 0.5kb downstream 4288 true Chr09: 13197905-13202192 Phaseolus vulgaris
Phvul.009G078900 0.5kb downstream 0.5kb downstream 500 false Chr09: 13197905-13198404 Phaseolus vulgaris
Phvul.009G078900 1.0kb upstream 1.0kb upstream 4788 true Chr09: 13198405-13203192 Phaseolus vulgaris
Phvul.009G078900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 13202193-13203192 Phaseolus vulgaris
Phvul.009G078900 1.0kb downstream 1.0kb downstream 4788 true Chr09: 13197405-13202192 Phaseolus vulgaris
Phvul.009G078900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 13197405-13198404 Phaseolus vulgaris
Phvul.009G078900 2.0kb upstream 2.0kb upstream 5788 true Chr09: 13198405-13204192 Phaseolus vulgaris
Phvul.009G078900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 13202193-13204192 Phaseolus vulgaris
Phvul.009G078900 2.0kb downstream 2.0kb downstream 5788 true Chr09: 13196405-13202192 Phaseolus vulgaris
Phvul.009G078900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 13196405-13198404 Phaseolus vulgaris
Phvul.009G078900 5.0kb upstream 5.0kb upstream 8788 true Chr09: 13198405-13207192 Phaseolus vulgaris
Phvul.009G078900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 13202193-13207192 Phaseolus vulgaris
Phvul.009G078900 5.0kb downstream 5.0kb downstream 8788 true Chr09: 13193405-13202192 Phaseolus vulgaris
Phvul.009G078900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 13193405-13198404 Phaseolus vulgaris
Phvul.009G078900 10.0kb upstream 10.0kb upstream 13788 true Chr09: 13198405-13212192 Phaseolus vulgaris
Phvul.009G078900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 13202193-13212192 Phaseolus vulgaris
Phvul.009G078900 10.0kb downstream 10.0kb downstream 13788 true Chr09: 13188405-13202192 Phaseolus vulgaris
Phvul.009G078900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 13188405-13198404 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311848 5265 Fabidae View MSA
124065419 5270 Rosid View MSA
123737318 5271 Pentapetalae View MSA
122791606 5272 Eudicot View MSA
122046404 5273 Angiosperm View MSA
121346413 5274 Embryophyte View MSA
123423946 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.8811 0.0 41.9384   High
cufflinks 6.88831 0.0 19.5291    
cufflinks 6.31855 0.0 18.0719    
cufflinks 11.0348 0.0 30.2179   High
cufflinks 6.06851 0.0 17.5835    
cufflinks 6.37371 0.0 18.1947    
cufflinks 6.30071 0.0 18.0338    
cufflinks 8.68701 0.0 23.9882    
cufflinks 5.7623 0.0 16.7375    
cufflinks 5.52389 0.0 16.0564    
cufflinks 6.2899 0.0 18.1016    

0 Strain