Gene : Phvul.006G167800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11214:SF92 - BETA-1,3-GALACTOSYLTRANSFERASE 20-RELATED Genomic Order:  1675
Name:  ? Phvul.006G167800 Secondary Identifier:  ? PAC:37173684
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G167800 0.5kb upstream 0.5kb upstream 7076 true Chr06: 27048698-27055773 Phaseolus vulgaris
Phvul.006G167800 0.5kb upstream 0.5kb upstream 500 false Chr06: 27055274-27055773 Phaseolus vulgaris
Phvul.006G167800 0.5kb downstream 0.5kb downstream 7076 true Chr06: 27048198-27055273 Phaseolus vulgaris
Phvul.006G167800 0.5kb downstream 0.5kb downstream 500 false Chr06: 27048198-27048697 Phaseolus vulgaris
Phvul.006G167800 1.0kb upstream 1.0kb upstream 7576 true Chr06: 27048698-27056273 Phaseolus vulgaris
Phvul.006G167800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 27055274-27056273 Phaseolus vulgaris
Phvul.006G167800 1.0kb downstream 1.0kb downstream 7576 true Chr06: 27047698-27055273 Phaseolus vulgaris
Phvul.006G167800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 27047698-27048697 Phaseolus vulgaris
Phvul.006G167800 2.0kb upstream 2.0kb upstream 8576 true Chr06: 27048698-27057273 Phaseolus vulgaris
Phvul.006G167800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 27055274-27057273 Phaseolus vulgaris
Phvul.006G167800 2.0kb downstream 2.0kb downstream 8576 true Chr06: 27046698-27055273 Phaseolus vulgaris
Phvul.006G167800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 27046698-27048697 Phaseolus vulgaris
Phvul.006G167800 5.0kb upstream 5.0kb upstream 11576 true Chr06: 27048698-27060273 Phaseolus vulgaris
Phvul.006G167800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27055274-27060273 Phaseolus vulgaris
Phvul.006G167800 5.0kb downstream 5.0kb downstream 11576 true Chr06: 27043698-27055273 Phaseolus vulgaris
Phvul.006G167800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 27043698-27048697 Phaseolus vulgaris
Phvul.006G167800 10.0kb upstream 10.0kb upstream 16576 true Chr06: 27048698-27065273 Phaseolus vulgaris
Phvul.006G167800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27055274-27065273 Phaseolus vulgaris
Phvul.006G167800 10.0kb downstream 10.0kb downstream 16576 true Chr06: 27038698-27055273 Phaseolus vulgaris
Phvul.006G167800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 27038698-27048697 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306660 5265 Fabidae View MSA
124064746 5270 Rosid View MSA
123750268 5271 Pentapetalae View MSA
122792852 5272 Eudicot View MSA
122049644 5273 Angiosperm View MSA
121350326 5274 Embryophyte View MSA
123381679 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.765343 0.0 2.53624    
cufflinks 1.04328 0.0 3.34486    
cufflinks 1.89318 0.0 5.66658    
cufflinks 0.489135 0.0 1.72529 Low Low
cufflinks 6.85249 0.0 18.2609   High
cufflinks 2.2002 0.0 6.46941    
cufflinks 1.20737 0.0 3.80389    
cufflinks 0.304566 0.0 1.11009 Low Low
cufflinks 2.49593 0.0 7.25794    
cufflinks 2.39076 0.0 6.98583    
cufflinks 5.85708 0.0 15.7717   High

0 Strain