Gene : Phvul.006G168109 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31384:SF3 - AUXIN RESPONSE FACTOR 6 Genomic Order:  1679
Name:  ? Phvul.006G168109 Secondary Identifier:  ? PAC:37171407
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G168109 0.5kb upstream 0.5kb upstream 7973 true Chr06: 27096791-27104763 Phaseolus vulgaris
Phvul.006G168109 0.5kb upstream 0.5kb upstream 500 false Chr06: 27096791-27097290 Phaseolus vulgaris
Phvul.006G168109 0.5kb downstream 0.5kb downstream 7973 true Chr06: 27097291-27105263 Phaseolus vulgaris
Phvul.006G168109 0.5kb downstream 0.5kb downstream 500 false Chr06: 27104764-27105263 Phaseolus vulgaris
Phvul.006G168109 1.0kb upstream 1.0kb upstream 8473 true Chr06: 27096291-27104763 Phaseolus vulgaris
Phvul.006G168109 1.0kb upstream 1.0kb upstream 1000 false Chr06: 27096291-27097290 Phaseolus vulgaris
Phvul.006G168109 1.0kb downstream 1.0kb downstream 8473 true Chr06: 27097291-27105763 Phaseolus vulgaris
Phvul.006G168109 1.0kb downstream 1.0kb downstream 1000 false Chr06: 27104764-27105763 Phaseolus vulgaris
Phvul.006G168109 2.0kb upstream 2.0kb upstream 9473 true Chr06: 27095291-27104763 Phaseolus vulgaris
Phvul.006G168109 2.0kb upstream 2.0kb upstream 2000 false Chr06: 27095291-27097290 Phaseolus vulgaris
Phvul.006G168109 2.0kb downstream 2.0kb downstream 9473 true Chr06: 27097291-27106763 Phaseolus vulgaris
Phvul.006G168109 2.0kb downstream 2.0kb downstream 2000 false Chr06: 27104764-27106763 Phaseolus vulgaris
Phvul.006G168109 5.0kb upstream 5.0kb upstream 12473 true Chr06: 27092291-27104763 Phaseolus vulgaris
Phvul.006G168109 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27092291-27097290 Phaseolus vulgaris
Phvul.006G168109 5.0kb downstream 5.0kb downstream 12473 true Chr06: 27097291-27109763 Phaseolus vulgaris
Phvul.006G168109 5.0kb downstream 5.0kb downstream 5000 false Chr06: 27104764-27109763 Phaseolus vulgaris
Phvul.006G168109 10.0kb upstream 10.0kb upstream 17473 true Chr06: 27087291-27104763 Phaseolus vulgaris
Phvul.006G168109 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27087291-27097290 Phaseolus vulgaris
Phvul.006G168109 10.0kb downstream 10.0kb downstream 17473 true Chr06: 27097291-27114763 Phaseolus vulgaris
Phvul.006G168109 10.0kb downstream 10.0kb downstream 10000 false Chr06: 27104764-27114763 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302206 5265 Fabidae View MSA
124073389 5270 Rosid View MSA
123749111 5271 Pentapetalae View MSA
122793528 5272 Eudicot View MSA
122048595 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.5781 0.0 42.9883    
cufflinks 40.2816 0.0 134.697 High  
cufflinks 40.112 0.0 169.181 High  
cufflinks 19.1139 0.0 55.2402    
cufflinks 48.2327 0.0 209.367 High High
cufflinks 30.5583 0.0 96.5665    
cufflinks 12.5852 0.0 43.0119    
cufflinks 4.57414 0.0 16.6077   Low
cufflinks 8.87506 0.0 30.3322   Low
cufflinks 45.4829 0.0 198.77 High  
cufflinks 39.8398 0.0 163.343 High  

0 Strain