Gene : Phvul.009G058900 P. vulgaris v2.1
Genomic Order:  595 Name:  ? Phvul.009G058900
Secondary Identifier:  ? PAC:37151938
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G058900 0.5kb upstream 0.5kb upstream 1216 true Chr09: 10881740-10882955 Phaseolus vulgaris
Phvul.009G058900 0.5kb upstream 0.5kb upstream 500 false Chr09: 10881740-10882239 Phaseolus vulgaris
Phvul.009G058900 0.5kb downstream 0.5kb downstream 1216 true Chr09: 10882240-10883455 Phaseolus vulgaris
Phvul.009G058900 0.5kb downstream 0.5kb downstream 500 false Chr09: 10882956-10883455 Phaseolus vulgaris
Phvul.009G058900 1.0kb upstream 1.0kb upstream 1716 true Chr09: 10881240-10882955 Phaseolus vulgaris
Phvul.009G058900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 10881240-10882239 Phaseolus vulgaris
Phvul.009G058900 1.0kb downstream 1.0kb downstream 1716 true Chr09: 10882240-10883955 Phaseolus vulgaris
Phvul.009G058900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 10882956-10883955 Phaseolus vulgaris
Phvul.009G058900 2.0kb upstream 2.0kb upstream 2716 true Chr09: 10880240-10882955 Phaseolus vulgaris
Phvul.009G058900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 10880240-10882239 Phaseolus vulgaris
Phvul.009G058900 2.0kb downstream 2.0kb downstream 2716 true Chr09: 10882240-10884955 Phaseolus vulgaris
Phvul.009G058900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 10882956-10884955 Phaseolus vulgaris
Phvul.009G058900 5.0kb upstream 5.0kb upstream 5716 true Chr09: 10877240-10882955 Phaseolus vulgaris
Phvul.009G058900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 10877240-10882239 Phaseolus vulgaris
Phvul.009G058900 5.0kb downstream 5.0kb downstream 5716 true Chr09: 10882240-10887955 Phaseolus vulgaris
Phvul.009G058900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 10882956-10887955 Phaseolus vulgaris
Phvul.009G058900 10.0kb upstream 10.0kb upstream 10716 true Chr09: 10872240-10882955 Phaseolus vulgaris
Phvul.009G058900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 10872240-10882239 Phaseolus vulgaris
Phvul.009G058900 10.0kb downstream 10.0kb downstream 10716 true Chr09: 10882240-10892955 Phaseolus vulgaris
Phvul.009G058900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 10882956-10892955 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297596 5265 Fabidae View MSA
124061990 5270 Rosid View MSA
123741829 5271 Pentapetalae View MSA
122794176 5272 Eudicot View MSA
122047280 5273 Angiosperm View MSA
121349070 5274 Embryophyte View MSA
123381150 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.36633 0.0 5.3998    
cufflinks 0.920784 0.0 3.75171    
cufflinks 0.645376 0.0 2.70974    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.94043 0.0 11.0232    
cufflinks 0.158618 0.0 0.764777 Low Low
cufflinks 3.00428 0.0 11.1377    
cufflinks 21.3852 0.0 64.1207   High
cufflinks 16.4607 0.0 50.9329   High
cufflinks 2.57513 0.0 9.70029    
cufflinks 0.63488 0.0 2.67726    

0 Strain