Gene : Phvul.006G168190 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10209//PTHR10209:SF176 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1688
Name:  ? Phvul.006G168190 Secondary Identifier:  ? PAC:37172287
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G168190 0.5kb upstream 0.5kb upstream 4894 true Chr06: 27170293-27175186 Phaseolus vulgaris
Phvul.006G168190 0.5kb upstream 0.5kb upstream 500 false Chr06: 27174687-27175186 Phaseolus vulgaris
Phvul.006G168190 0.5kb downstream 0.5kb downstream 4894 true Chr06: 27169793-27174686 Phaseolus vulgaris
Phvul.006G168190 0.5kb downstream 0.5kb downstream 500 false Chr06: 27169793-27170292 Phaseolus vulgaris
Phvul.006G168190 1.0kb upstream 1.0kb upstream 5394 true Chr06: 27170293-27175686 Phaseolus vulgaris
Phvul.006G168190 1.0kb upstream 1.0kb upstream 1000 false Chr06: 27174687-27175686 Phaseolus vulgaris
Phvul.006G168190 1.0kb downstream 1.0kb downstream 5394 true Chr06: 27169293-27174686 Phaseolus vulgaris
Phvul.006G168190 1.0kb downstream 1.0kb downstream 1000 false Chr06: 27169293-27170292 Phaseolus vulgaris
Phvul.006G168190 2.0kb upstream 2.0kb upstream 6394 true Chr06: 27170293-27176686 Phaseolus vulgaris
Phvul.006G168190 2.0kb upstream 2.0kb upstream 2000 false Chr06: 27174687-27176686 Phaseolus vulgaris
Phvul.006G168190 2.0kb downstream 2.0kb downstream 6394 true Chr06: 27168293-27174686 Phaseolus vulgaris
Phvul.006G168190 2.0kb downstream 2.0kb downstream 2000 false Chr06: 27168293-27170292 Phaseolus vulgaris
Phvul.006G168190 5.0kb upstream 5.0kb upstream 9394 true Chr06: 27170293-27179686 Phaseolus vulgaris
Phvul.006G168190 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27174687-27179686 Phaseolus vulgaris
Phvul.006G168190 5.0kb downstream 5.0kb downstream 9394 true Chr06: 27165293-27174686 Phaseolus vulgaris
Phvul.006G168190 5.0kb downstream 5.0kb downstream 5000 false Chr06: 27165293-27170292 Phaseolus vulgaris
Phvul.006G168190 10.0kb upstream 10.0kb upstream 14394 true Chr06: 27170293-27184686 Phaseolus vulgaris
Phvul.006G168190 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27174687-27184686 Phaseolus vulgaris
Phvul.006G168190 10.0kb downstream 10.0kb downstream 14394 true Chr06: 27160293-27174686 Phaseolus vulgaris
Phvul.006G168190 10.0kb downstream 10.0kb downstream 10000 false Chr06: 27160293-27170292 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312592 5265 Fabidae View MSA
124070161 5270 Rosid View MSA
123753331 5271 Pentapetalae View MSA
122797647 5272 Eudicot View MSA
122051611 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121351374 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.40563 0.0 1.56485 Low  
cufflinks 0.255234 0.0 1.02172 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 14.4247 0.0 39.14   High
cufflinks 0.78896 0.0 2.90627    
cufflinks 0.346903 0.0 1.3545 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0976601 0.0 0.424132 Low  
cufflinks 0.0442782 0.0 0.209191 Low Low
cufflinks 3.83853 0.0 11.8969   High

0 Strain