Gene : Phvul.009G063300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33348:SF3 - C-TERMINALLY ENCODED PEPTIDE 1 Genomic Order:  644
Name:  ? Phvul.009G063300 Secondary Identifier:  ? PAC:37150860
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G063300 0.5kb upstream 0.5kb upstream 1110 true Chr09: 11343038-11344147 Phaseolus vulgaris
Phvul.009G063300 0.5kb upstream 0.5kb upstream 500 false Chr09: 11343648-11344147 Phaseolus vulgaris
Phvul.009G063300 0.5kb downstream 0.5kb downstream 1110 true Chr09: 11342538-11343647 Phaseolus vulgaris
Phvul.009G063300 0.5kb downstream 0.5kb downstream 500 false Chr09: 11342538-11343037 Phaseolus vulgaris
Phvul.009G063300 1.0kb upstream 1.0kb upstream 1610 true Chr09: 11343038-11344647 Phaseolus vulgaris
Phvul.009G063300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 11343648-11344647 Phaseolus vulgaris
Phvul.009G063300 1.0kb downstream 1.0kb downstream 1610 true Chr09: 11342038-11343647 Phaseolus vulgaris
Phvul.009G063300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 11342038-11343037 Phaseolus vulgaris
Phvul.009G063300 2.0kb upstream 2.0kb upstream 2610 true Chr09: 11343038-11345647 Phaseolus vulgaris
Phvul.009G063300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 11343648-11345647 Phaseolus vulgaris
Phvul.009G063300 2.0kb downstream 2.0kb downstream 2610 true Chr09: 11341038-11343647 Phaseolus vulgaris
Phvul.009G063300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 11341038-11343037 Phaseolus vulgaris
Phvul.009G063300 5.0kb upstream 5.0kb upstream 5610 true Chr09: 11343038-11348647 Phaseolus vulgaris
Phvul.009G063300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 11343648-11348647 Phaseolus vulgaris
Phvul.009G063300 5.0kb downstream 5.0kb downstream 5610 true Chr09: 11338038-11343647 Phaseolus vulgaris
Phvul.009G063300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 11338038-11343037 Phaseolus vulgaris
Phvul.009G063300 10.0kb upstream 10.0kb upstream 10610 true Chr09: 11343038-11353647 Phaseolus vulgaris
Phvul.009G063300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 11343648-11353647 Phaseolus vulgaris
Phvul.009G063300 10.0kb downstream 10.0kb downstream 10610 true Chr09: 11333038-11343647 Phaseolus vulgaris
Phvul.009G063300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 11333038-11343037 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121617922 5273 Angiosperm View MSA
122254500 5265 Fabidae View MSA
123996626 5270 Rosid View MSA
123571063 5271 Pentapetalae View MSA
122605793 5272 Eudicot View MSA
120890052 5274 Embryophyte View MSA
122930744 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.360991 0.0 1.52247 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.81547 0.0 16.1303    

0 Strain