Gene : Phvul.006G170400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11566:SF45 - DYNAMIN-RELATED PROTEIN 4C-RELATED Genomic Order:  1711
Name:  ? Phvul.006G170400 Secondary Identifier:  ? PAC:37173085
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G170400 0.5kb upstream 0.5kb upstream 2764 true Chr06: 27378625-27381388 Phaseolus vulgaris
Phvul.006G170400 0.5kb upstream 0.5kb upstream 500 false Chr06: 27378625-27379124 Phaseolus vulgaris
Phvul.006G170400 0.5kb downstream 0.5kb downstream 2764 true Chr06: 27379125-27381888 Phaseolus vulgaris
Phvul.006G170400 0.5kb downstream 0.5kb downstream 500 false Chr06: 27381389-27381888 Phaseolus vulgaris
Phvul.006G170400 1.0kb upstream 1.0kb upstream 3264 true Chr06: 27378125-27381388 Phaseolus vulgaris
Phvul.006G170400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 27378125-27379124 Phaseolus vulgaris
Phvul.006G170400 1.0kb downstream 1.0kb downstream 3264 true Chr06: 27379125-27382388 Phaseolus vulgaris
Phvul.006G170400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 27381389-27382388 Phaseolus vulgaris
Phvul.006G170400 2.0kb upstream 2.0kb upstream 4264 true Chr06: 27377125-27381388 Phaseolus vulgaris
Phvul.006G170400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 27377125-27379124 Phaseolus vulgaris
Phvul.006G170400 2.0kb downstream 2.0kb downstream 4264 true Chr06: 27379125-27383388 Phaseolus vulgaris
Phvul.006G170400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 27381389-27383388 Phaseolus vulgaris
Phvul.006G170400 5.0kb upstream 5.0kb upstream 7264 true Chr06: 27374125-27381388 Phaseolus vulgaris
Phvul.006G170400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27374125-27379124 Phaseolus vulgaris
Phvul.006G170400 5.0kb downstream 5.0kb downstream 7264 true Chr06: 27379125-27386388 Phaseolus vulgaris
Phvul.006G170400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 27381389-27386388 Phaseolus vulgaris
Phvul.006G170400 10.0kb upstream 10.0kb upstream 12264 true Chr06: 27369125-27381388 Phaseolus vulgaris
Phvul.006G170400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27369125-27379124 Phaseolus vulgaris
Phvul.006G170400 10.0kb downstream 10.0kb downstream 12264 true Chr06: 27379125-27391388 Phaseolus vulgaris
Phvul.006G170400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 27381389-27391388 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028487 5273 Angiosperm View MSA
122313012 5265 Fabidae View MSA
124050430 5270 Rosid View MSA
123744876 5271 Pentapetalae View MSA
122787544 5272 Eudicot View MSA
121349568 5274 Embryophyte View MSA
123426795 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0427187 0.0 0.188832 Low  
cufflinks 0.976361 0.0 3.27167   High
cufflinks 0.0243312 0.0 0.113644 Low  
cufflinks 0.11424 0.0 0.4662 Low  
cufflinks 0.45625 0.0 1.66338 Low High
cufflinks 0.0184702 0.0 0.0890541 Low Low
cufflinks 0.0487702 0.0 0.21335 Low  
cufflinks 0.0808078 0.0 0.336213 Low  
cufflinks 0.0180976 0.0 0.0879029 Low Low
cufflinks 0.0537317 0.0 0.233188 Low  
cufflinks 0.440582 0.0 1.61091 Low High

0 Strain