Gene : Phvul.006G170000 P. vulgaris v2.1
Defline:  (1 of 2) PF06884 - Protein of unknown function (DUF1264) (DUF1264) Genomic Order:  1707
Name:  ? Phvul.006G170000 Secondary Identifier:  ? PAC:37173946
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G170000 0.5kb upstream 0.5kb upstream 1776 true Chr06: 27357329-27359104 Phaseolus vulgaris
Phvul.006G170000 0.5kb upstream 0.5kb upstream 500 false Chr06: 27358605-27359104 Phaseolus vulgaris
Phvul.006G170000 0.5kb downstream 0.5kb downstream 1776 true Chr06: 27356829-27358604 Phaseolus vulgaris
Phvul.006G170000 0.5kb downstream 0.5kb downstream 500 false Chr06: 27356829-27357328 Phaseolus vulgaris
Phvul.006G170000 1.0kb upstream 1.0kb upstream 2276 true Chr06: 27357329-27359604 Phaseolus vulgaris
Phvul.006G170000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 27358605-27359604 Phaseolus vulgaris
Phvul.006G170000 1.0kb downstream 1.0kb downstream 2276 true Chr06: 27356329-27358604 Phaseolus vulgaris
Phvul.006G170000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 27356329-27357328 Phaseolus vulgaris
Phvul.006G170000 2.0kb upstream 2.0kb upstream 3276 true Chr06: 27357329-27360604 Phaseolus vulgaris
Phvul.006G170000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 27358605-27360604 Phaseolus vulgaris
Phvul.006G170000 2.0kb downstream 2.0kb downstream 3276 true Chr06: 27355329-27358604 Phaseolus vulgaris
Phvul.006G170000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 27355329-27357328 Phaseolus vulgaris
Phvul.006G170000 5.0kb upstream 5.0kb upstream 6276 true Chr06: 27357329-27363604 Phaseolus vulgaris
Phvul.006G170000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27358605-27363604 Phaseolus vulgaris
Phvul.006G170000 5.0kb downstream 5.0kb downstream 6276 true Chr06: 27352329-27358604 Phaseolus vulgaris
Phvul.006G170000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 27352329-27357328 Phaseolus vulgaris
Phvul.006G170000 10.0kb upstream 10.0kb upstream 11276 true Chr06: 27357329-27368604 Phaseolus vulgaris
Phvul.006G170000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27358605-27368604 Phaseolus vulgaris
Phvul.006G170000 10.0kb downstream 10.0kb downstream 11276 true Chr06: 27347329-27358604 Phaseolus vulgaris
Phvul.006G170000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 27347329-27357328 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308012 5265 Fabidae View MSA
124069550 5270 Rosid View MSA
123749042 5271 Pentapetalae View MSA
122790302 5272 Eudicot View MSA
122044029 5273 Angiosperm View MSA
121350968 5274 Embryophyte View MSA
123426811 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0318571 0.0 0.159114 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.110819 0.0 0.485372 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.056297 0.0 0.264268 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0699453 0.0 0.320759 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain