Gene : Phvul.006G173300 P. vulgaris v2.1
Defline:  (1 of 10) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Genomic Order:  1740
Name:  ? Phvul.006G173300 Secondary Identifier:  ? PAC:37171842
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G173300 0.5kb upstream 0.5kb upstream 1653 true Chr06: 27652243-27653895 Phaseolus vulgaris
Phvul.006G173300 0.5kb upstream 0.5kb upstream 500 false Chr06: 27652243-27652742 Phaseolus vulgaris
Phvul.006G173300 0.5kb downstream 0.5kb downstream 1653 true Chr06: 27652743-27654395 Phaseolus vulgaris
Phvul.006G173300 0.5kb downstream 0.5kb downstream 500 false Chr06: 27653896-27654395 Phaseolus vulgaris
Phvul.006G173300 1.0kb upstream 1.0kb upstream 2153 true Chr06: 27651743-27653895 Phaseolus vulgaris
Phvul.006G173300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 27651743-27652742 Phaseolus vulgaris
Phvul.006G173300 1.0kb downstream 1.0kb downstream 2153 true Chr06: 27652743-27654895 Phaseolus vulgaris
Phvul.006G173300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 27653896-27654895 Phaseolus vulgaris
Phvul.006G173300 2.0kb upstream 2.0kb upstream 3153 true Chr06: 27650743-27653895 Phaseolus vulgaris
Phvul.006G173300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 27650743-27652742 Phaseolus vulgaris
Phvul.006G173300 2.0kb downstream 2.0kb downstream 3153 true Chr06: 27652743-27655895 Phaseolus vulgaris
Phvul.006G173300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 27653896-27655895 Phaseolus vulgaris
Phvul.006G173300 5.0kb upstream 5.0kb upstream 6153 true Chr06: 27647743-27653895 Phaseolus vulgaris
Phvul.006G173300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27647743-27652742 Phaseolus vulgaris
Phvul.006G173300 5.0kb downstream 5.0kb downstream 6153 true Chr06: 27652743-27658895 Phaseolus vulgaris
Phvul.006G173300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 27653896-27658895 Phaseolus vulgaris
Phvul.006G173300 10.0kb upstream 10.0kb upstream 11153 true Chr06: 27642743-27653895 Phaseolus vulgaris
Phvul.006G173300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27642743-27652742 Phaseolus vulgaris
Phvul.006G173300 10.0kb downstream 10.0kb downstream 11153 true Chr06: 27652743-27663895 Phaseolus vulgaris
Phvul.006G173300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 27653896-27663895 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309293 5265 Fabidae View MSA
124069452 5270 Rosid View MSA
123750929 5271 Pentapetalae View MSA
122791685 5272 Eudicot View MSA
122049141 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.94764 0.0 6.7459   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.68221 0.0 17.2968    
cufflinks 2.8219 0.0 9.41849    
cufflinks 5.79459 0.0 17.9117    
cufflinks 2.18535 0.0 7.44819    
cufflinks 4.15648 0.0 13.1093    
cufflinks 1.59027 0.0 5.58584   Low
cufflinks 5.01005 0.0 15.4864    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.59723 0.0 19.947   High

0 Strain