Gene : Phvul.006G171400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR15629//PTHR15629:SF9 - SH3YL1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1721
Name:  ? Phvul.006G171400 Secondary Identifier:  ? PAC:37172513
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G171400 0.5kb upstream 0.5kb upstream 4349 true Chr06: 27454380-27458728 Phaseolus vulgaris
Phvul.006G171400 0.5kb upstream 0.5kb upstream 500 false Chr06: 27454380-27454879 Phaseolus vulgaris
Phvul.006G171400 0.5kb downstream 0.5kb downstream 4349 true Chr06: 27454880-27459228 Phaseolus vulgaris
Phvul.006G171400 0.5kb downstream 0.5kb downstream 500 false Chr06: 27458729-27459228 Phaseolus vulgaris
Phvul.006G171400 1.0kb upstream 1.0kb upstream 4849 true Chr06: 27453880-27458728 Phaseolus vulgaris
Phvul.006G171400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 27453880-27454879 Phaseolus vulgaris
Phvul.006G171400 1.0kb downstream 1.0kb downstream 4849 true Chr06: 27454880-27459728 Phaseolus vulgaris
Phvul.006G171400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 27458729-27459728 Phaseolus vulgaris
Phvul.006G171400 2.0kb upstream 2.0kb upstream 5849 true Chr06: 27452880-27458728 Phaseolus vulgaris
Phvul.006G171400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 27452880-27454879 Phaseolus vulgaris
Phvul.006G171400 2.0kb downstream 2.0kb downstream 5849 true Chr06: 27454880-27460728 Phaseolus vulgaris
Phvul.006G171400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 27458729-27460728 Phaseolus vulgaris
Phvul.006G171400 5.0kb upstream 5.0kb upstream 8849 true Chr06: 27449880-27458728 Phaseolus vulgaris
Phvul.006G171400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27449880-27454879 Phaseolus vulgaris
Phvul.006G171400 5.0kb downstream 5.0kb downstream 8849 true Chr06: 27454880-27463728 Phaseolus vulgaris
Phvul.006G171400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 27458729-27463728 Phaseolus vulgaris
Phvul.006G171400 10.0kb upstream 10.0kb upstream 13849 true Chr06: 27444880-27458728 Phaseolus vulgaris
Phvul.006G171400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27444880-27454879 Phaseolus vulgaris
Phvul.006G171400 10.0kb downstream 10.0kb downstream 13849 true Chr06: 27454880-27468728 Phaseolus vulgaris
Phvul.006G171400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 27458729-27468728 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312037 5265 Fabidae View MSA
124073476 5270 Rosid View MSA
123736905 5271 Pentapetalae View MSA
122785686 5272 Eudicot View MSA
122047876 5273 Angiosperm View MSA
121349418 5274 Embryophyte View MSA
123426176 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.7004 0.0 127.418 High High
cufflinks 15.5667 0.0 40.3759    
cufflinks 12.5987 0.0 32.9069    
cufflinks 13.12 0.0 34.3951    
cufflinks 15.42 0.0 40.0498    
cufflinks 10.8723 0.0 28.6343    
cufflinks 15.3784 0.0 39.9137    
cufflinks 11.0361 0.0 28.9927    
cufflinks 14.8857 0.0 38.713    
cufflinks 23.0797 0.0 59.6892    
cufflinks 15.7079 0.0 40.7729    

0 Strain