Gene : Phvul.009G065600 P. vulgaris v2.1
Defline:  (1 of 2) K13174 - THO complex subunit 5 (THOC5) Genomic Order:  668
Name:  ? Phvul.009G065600 Secondary Identifier:  ? PAC:37151929
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G065600 0.5kb upstream 0.5kb upstream 7008 true Chr09: 11539385-11546392 Phaseolus vulgaris
Phvul.009G065600 0.5kb upstream 0.5kb upstream 500 false Chr09: 11545893-11546392 Phaseolus vulgaris
Phvul.009G065600 0.5kb downstream 0.5kb downstream 7008 true Chr09: 11538885-11545892 Phaseolus vulgaris
Phvul.009G065600 0.5kb downstream 0.5kb downstream 500 false Chr09: 11538885-11539384 Phaseolus vulgaris
Phvul.009G065600 1.0kb upstream 1.0kb upstream 7508 true Chr09: 11539385-11546892 Phaseolus vulgaris
Phvul.009G065600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 11545893-11546892 Phaseolus vulgaris
Phvul.009G065600 1.0kb downstream 1.0kb downstream 7508 true Chr09: 11538385-11545892 Phaseolus vulgaris
Phvul.009G065600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 11538385-11539384 Phaseolus vulgaris
Phvul.009G065600 2.0kb upstream 2.0kb upstream 8508 true Chr09: 11539385-11547892 Phaseolus vulgaris
Phvul.009G065600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 11545893-11547892 Phaseolus vulgaris
Phvul.009G065600 2.0kb downstream 2.0kb downstream 8508 true Chr09: 11537385-11545892 Phaseolus vulgaris
Phvul.009G065600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 11537385-11539384 Phaseolus vulgaris
Phvul.009G065600 5.0kb upstream 5.0kb upstream 11508 true Chr09: 11539385-11550892 Phaseolus vulgaris
Phvul.009G065600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 11545893-11550892 Phaseolus vulgaris
Phvul.009G065600 5.0kb downstream 5.0kb downstream 11508 true Chr09: 11534385-11545892 Phaseolus vulgaris
Phvul.009G065600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 11534385-11539384 Phaseolus vulgaris
Phvul.009G065600 10.0kb upstream 10.0kb upstream 16508 true Chr09: 11539385-11555892 Phaseolus vulgaris
Phvul.009G065600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 11545893-11555892 Phaseolus vulgaris
Phvul.009G065600 10.0kb downstream 10.0kb downstream 16508 true Chr09: 11529385-11545892 Phaseolus vulgaris
Phvul.009G065600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 11529385-11539384 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307391 5265 Fabidae View MSA
124064206 5270 Rosid View MSA
123737010 5271 Pentapetalae View MSA
122786339 5272 Eudicot View MSA
122045756 5273 Angiosperm View MSA
121346778 5274 Embryophyte View MSA
123425483 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.90785 0.0 8.18534   Low
cufflinks 6.38052 0.0 16.8513    
cufflinks 7.8483 0.0 20.4687    
cufflinks 3.71391 0.0 10.2828   Low
cufflinks 6.24883 0.0 16.6021    
cufflinks 10.8581 0.0 28.091   High
cufflinks 7.28495 0.0 19.0703    
cufflinks 7.23375 0.0 18.91    
cufflinks 9.016 0.0 23.4207    
cufflinks 5.83703 0.0 15.5205    
cufflinks 6.76574 0.0 17.8531    

0 Strain