Gene : Phvul.009G065200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10438:SF229 - THIOREDOXIN-LIKE 4, CHLOROPLASTIC Genomic Order:  664
Name:  ? Phvul.009G065200 Secondary Identifier:  ? PAC:37151429
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G065200 0.5kb upstream 0.5kb upstream 3306 true Chr09: 11493985-11497290 Phaseolus vulgaris
Phvul.009G065200 0.5kb upstream 0.5kb upstream 500 false Chr09: 11493985-11494484 Phaseolus vulgaris
Phvul.009G065200 0.5kb downstream 0.5kb downstream 3306 true Chr09: 11494485-11497790 Phaseolus vulgaris
Phvul.009G065200 0.5kb downstream 0.5kb downstream 500 false Chr09: 11497291-11497790 Phaseolus vulgaris
Phvul.009G065200 1.0kb upstream 1.0kb upstream 3806 true Chr09: 11493485-11497290 Phaseolus vulgaris
Phvul.009G065200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 11493485-11494484 Phaseolus vulgaris
Phvul.009G065200 1.0kb downstream 1.0kb downstream 3806 true Chr09: 11494485-11498290 Phaseolus vulgaris
Phvul.009G065200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 11497291-11498290 Phaseolus vulgaris
Phvul.009G065200 2.0kb upstream 2.0kb upstream 4806 true Chr09: 11492485-11497290 Phaseolus vulgaris
Phvul.009G065200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 11492485-11494484 Phaseolus vulgaris
Phvul.009G065200 2.0kb downstream 2.0kb downstream 4806 true Chr09: 11494485-11499290 Phaseolus vulgaris
Phvul.009G065200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 11497291-11499290 Phaseolus vulgaris
Phvul.009G065200 5.0kb upstream 5.0kb upstream 7806 true Chr09: 11489485-11497290 Phaseolus vulgaris
Phvul.009G065200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 11489485-11494484 Phaseolus vulgaris
Phvul.009G065200 5.0kb downstream 5.0kb downstream 7806 true Chr09: 11494485-11502290 Phaseolus vulgaris
Phvul.009G065200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 11497291-11502290 Phaseolus vulgaris
Phvul.009G065200 10.0kb upstream 10.0kb upstream 12806 true Chr09: 11484485-11497290 Phaseolus vulgaris
Phvul.009G065200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 11484485-11494484 Phaseolus vulgaris
Phvul.009G065200 10.0kb downstream 10.0kb downstream 12806 true Chr09: 11494485-11507290 Phaseolus vulgaris
Phvul.009G065200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 11497291-11507290 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309782 5265 Fabidae View MSA
124065486 5270 Rosid View MSA
123744496 5271 Pentapetalae View MSA
122794437 5272 Eudicot View MSA
122048480 5273 Angiosperm View MSA
121346716 5274 Embryophyte View MSA
123427646 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.7893 0.0 34.6361    
cufflinks 12.0408 0.0 32.8234    
cufflinks 65.3686 0.0 172.107 High High
cufflinks 8.61555 0.0 24.3641    
cufflinks 13.3253 0.0 36.2313    
cufflinks 25.1014 0.0 65.2542    
cufflinks 0.176965 0.0 0.727558 Low Low
cufflinks 0.102183 0.0 0.438025 Low Low
cufflinks 0.593246 0.0 2.22249    
cufflinks 4.94189 0.0 14.7343    
cufflinks 8.39583 0.0 23.7752    

0 Strain