Gene : Phvul.006G158800 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31621:SF1 - DUF679 DOMAIN MEMBRANE PROTEIN 1 Genomic Order:  1586
Name:  ? Phvul.006G158800 Secondary Identifier:  ? PAC:37174208
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G158800 0.5kb upstream 0.5kb upstream 1112 true Chr06: 26314379-26315490 Phaseolus vulgaris
Phvul.006G158800 0.5kb upstream 0.5kb upstream 500 false Chr06: 26314991-26315490 Phaseolus vulgaris
Phvul.006G158800 0.5kb downstream 0.5kb downstream 1112 true Chr06: 26313879-26314990 Phaseolus vulgaris
Phvul.006G158800 0.5kb downstream 0.5kb downstream 500 false Chr06: 26313879-26314378 Phaseolus vulgaris
Phvul.006G158800 1.0kb upstream 1.0kb upstream 1612 true Chr06: 26314379-26315990 Phaseolus vulgaris
Phvul.006G158800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 26314991-26315990 Phaseolus vulgaris
Phvul.006G158800 1.0kb downstream 1.0kb downstream 1612 true Chr06: 26313379-26314990 Phaseolus vulgaris
Phvul.006G158800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 26313379-26314378 Phaseolus vulgaris
Phvul.006G158800 2.0kb upstream 2.0kb upstream 2612 true Chr06: 26314379-26316990 Phaseolus vulgaris
Phvul.006G158800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 26314991-26316990 Phaseolus vulgaris
Phvul.006G158800 2.0kb downstream 2.0kb downstream 2612 true Chr06: 26312379-26314990 Phaseolus vulgaris
Phvul.006G158800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 26312379-26314378 Phaseolus vulgaris
Phvul.006G158800 5.0kb upstream 5.0kb upstream 5612 true Chr06: 26314379-26319990 Phaseolus vulgaris
Phvul.006G158800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 26314991-26319990 Phaseolus vulgaris
Phvul.006G158800 5.0kb downstream 5.0kb downstream 5612 true Chr06: 26309379-26314990 Phaseolus vulgaris
Phvul.006G158800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 26309379-26314378 Phaseolus vulgaris
Phvul.006G158800 10.0kb upstream 10.0kb upstream 10612 true Chr06: 26314379-26324990 Phaseolus vulgaris
Phvul.006G158800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 26314991-26324990 Phaseolus vulgaris
Phvul.006G158800 10.0kb downstream 10.0kb downstream 10612 true Chr06: 26304379-26314990 Phaseolus vulgaris
Phvul.006G158800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 26304379-26314378 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310165 5265 Fabidae View MSA
124066141 5270 Rosid View MSA
123749826 5271 Pentapetalae View MSA
122795559 5272 Eudicot View MSA
122046671 5273 Angiosperm View MSA
121349168 5274 Embryophyte View MSA
123426818 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 383.358 0.0 1072.7 High High
cufflinks 33.235 0.0 90.9902 High  
cufflinks 7.95162 0.0 25.4433    
cufflinks 86.5218 0.0 223.666 High  
cufflinks 45.031 0.0 120.025 High  
cufflinks 4.30562 0.0 14.7494    
cufflinks 3.76089 0.0 12.9923    
cufflinks 0.730011 0.0 2.92807   Low
cufflinks 10.1562 0.0 31.3304    
cufflinks 321.496 0.0 881.462 High High
cufflinks 14.3825 0.0 42.5392    

0 Strain