Gene : Phvul.006G159200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10869:SF64 - OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN-RELATED Genomic Order:  1590
Name:  ? Phvul.006G159200 Secondary Identifier:  ? PAC:37171857
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G159200 0.5kb upstream 0.5kb upstream 4706 true Chr06: 26332392-26337097 Phaseolus vulgaris
Phvul.006G159200 0.5kb upstream 0.5kb upstream 500 false Chr06: 26332392-26332891 Phaseolus vulgaris
Phvul.006G159200 0.5kb downstream 0.5kb downstream 4706 true Chr06: 26332892-26337597 Phaseolus vulgaris
Phvul.006G159200 0.5kb downstream 0.5kb downstream 500 false Chr06: 26337098-26337597 Phaseolus vulgaris
Phvul.006G159200 1.0kb upstream 1.0kb upstream 5206 true Chr06: 26331892-26337097 Phaseolus vulgaris
Phvul.006G159200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 26331892-26332891 Phaseolus vulgaris
Phvul.006G159200 1.0kb downstream 1.0kb downstream 5206 true Chr06: 26332892-26338097 Phaseolus vulgaris
Phvul.006G159200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 26337098-26338097 Phaseolus vulgaris
Phvul.006G159200 2.0kb upstream 2.0kb upstream 6206 true Chr06: 26330892-26337097 Phaseolus vulgaris
Phvul.006G159200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 26330892-26332891 Phaseolus vulgaris
Phvul.006G159200 2.0kb downstream 2.0kb downstream 6206 true Chr06: 26332892-26339097 Phaseolus vulgaris
Phvul.006G159200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 26337098-26339097 Phaseolus vulgaris
Phvul.006G159200 5.0kb upstream 5.0kb upstream 9206 true Chr06: 26327892-26337097 Phaseolus vulgaris
Phvul.006G159200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 26327892-26332891 Phaseolus vulgaris
Phvul.006G159200 5.0kb downstream 5.0kb downstream 9206 true Chr06: 26332892-26342097 Phaseolus vulgaris
Phvul.006G159200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 26337098-26342097 Phaseolus vulgaris
Phvul.006G159200 10.0kb upstream 10.0kb upstream 14206 true Chr06: 26322892-26337097 Phaseolus vulgaris
Phvul.006G159200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 26322892-26332891 Phaseolus vulgaris
Phvul.006G159200 10.0kb downstream 10.0kb downstream 14206 true Chr06: 26332892-26347097 Phaseolus vulgaris
Phvul.006G159200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 26337098-26347097 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314499 5265 Fabidae View MSA
124061435 5270 Rosid View MSA
123741121 5271 Pentapetalae View MSA
122788089 5272 Eudicot View MSA
122045876 5273 Angiosperm View MSA
121349816 5274 Embryophyte View MSA
123428732 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.90245 0.0 68.0687    
cufflinks 4.64501 0.0 73.5547    
cufflinks 2.37285 0.0 21.5465   Low
cufflinks 11.8005 0.0 124.929   High
cufflinks 3.99023 0.0 91.8224    
cufflinks 1.86784 0.0 37.0712   Low
cufflinks 6.7126 0.0 66.6228    
cufflinks 8.88578 0.0 81.4996    
cufflinks 12.718 0.0 118.556   High
cufflinks 2.80729 0.0 46.3787    
cufflinks 4.16774 0.0 137.695    

0 Strain