Gene : Phvul.009G051400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33868:SF2 - EXPRESSED PROTEIN Genomic Order:  519
Name:  ? Phvul.009G051400 Secondary Identifier:  ? PAC:37149258
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G051400 0.5kb upstream 0.5kb upstream 4494 true Chr09: 9949205-9953698 Phaseolus vulgaris
Phvul.009G051400 0.5kb upstream 0.5kb upstream 500 false Chr09: 9949205-9949704 Phaseolus vulgaris
Phvul.009G051400 0.5kb downstream 0.5kb downstream 4494 true Chr09: 9949705-9954198 Phaseolus vulgaris
Phvul.009G051400 0.5kb downstream 0.5kb downstream 500 false Chr09: 9953699-9954198 Phaseolus vulgaris
Phvul.009G051400 1.0kb upstream 1.0kb upstream 4994 true Chr09: 9948705-9953698 Phaseolus vulgaris
Phvul.009G051400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 9948705-9949704 Phaseolus vulgaris
Phvul.009G051400 1.0kb downstream 1.0kb downstream 4994 true Chr09: 9949705-9954698 Phaseolus vulgaris
Phvul.009G051400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 9953699-9954698 Phaseolus vulgaris
Phvul.009G051400 2.0kb upstream 2.0kb upstream 5994 true Chr09: 9947705-9953698 Phaseolus vulgaris
Phvul.009G051400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 9947705-9949704 Phaseolus vulgaris
Phvul.009G051400 2.0kb downstream 2.0kb downstream 5994 true Chr09: 9949705-9955698 Phaseolus vulgaris
Phvul.009G051400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 9953699-9955698 Phaseolus vulgaris
Phvul.009G051400 5.0kb upstream 5.0kb upstream 8994 true Chr09: 9944705-9953698 Phaseolus vulgaris
Phvul.009G051400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 9944705-9949704 Phaseolus vulgaris
Phvul.009G051400 5.0kb downstream 5.0kb downstream 8994 true Chr09: 9949705-9958698 Phaseolus vulgaris
Phvul.009G051400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 9953699-9958698 Phaseolus vulgaris
Phvul.009G051400 10.0kb upstream 10.0kb upstream 13994 true Chr09: 9939705-9953698 Phaseolus vulgaris
Phvul.009G051400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 9939705-9949704 Phaseolus vulgaris
Phvul.009G051400 10.0kb downstream 10.0kb downstream 13994 true Chr09: 9949705-9963698 Phaseolus vulgaris
Phvul.009G051400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 9953699-9963698 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301867 5265 Fabidae View MSA
124070490 5270 Rosid View MSA
123747466 5271 Pentapetalae View MSA
122788794 5272 Eudicot View MSA
122043778 5273 Angiosperm View MSA
121348592 5274 Embryophyte View MSA
123380930 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.0828 0.0 94.1178 High High
cufflinks 10.559 0.0 28.0774    
cufflinks 11.4669 0.0 30.2387    
cufflinks 6.38402 0.0 17.7925   Low
cufflinks 11.1427 0.0 29.6426    
cufflinks 10.7333 0.0 28.4991    
cufflinks 10.7038 0.0 28.4087    
cufflinks 5.62845 0.0 15.6987   Low
cufflinks 8.93456 0.0 24.0619    
cufflinks 22.1873 0.0 57.3564   High
cufflinks 9.61381 0.0 25.8166    

0 Strain