Gene : Phvul.006G157800 P. vulgaris v2.1
Defline:  (1 of 4) 4.1.1.50 - Adenosylmethionine decarboxylase / S-adenosyl-L-methionine decarboxylase Genomic Order:  1576
Name:  ? Phvul.006G157800 Secondary Identifier:  ? PAC:37172715
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ARGSPECAT-PWY Phaseolus vulgaris pathologic  
Pvulgaris BSUBPOLYAMSYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris POLYAMINSYN3-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-7528 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G157800 0.5kb upstream 0.5kb upstream 1810 true Chr06: 26263116-26264925 Phaseolus vulgaris
Phvul.006G157800 0.5kb upstream 0.5kb upstream 500 false Chr06: 26263116-26263615 Phaseolus vulgaris
Phvul.006G157800 0.5kb downstream 0.5kb downstream 1810 true Chr06: 26263616-26265425 Phaseolus vulgaris
Phvul.006G157800 0.5kb downstream 0.5kb downstream 500 false Chr06: 26264926-26265425 Phaseolus vulgaris
Phvul.006G157800 1.0kb upstream 1.0kb upstream 2310 true Chr06: 26262616-26264925 Phaseolus vulgaris
Phvul.006G157800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 26262616-26263615 Phaseolus vulgaris
Phvul.006G157800 1.0kb downstream 1.0kb downstream 2310 true Chr06: 26263616-26265925 Phaseolus vulgaris
Phvul.006G157800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 26264926-26265925 Phaseolus vulgaris
Phvul.006G157800 2.0kb upstream 2.0kb upstream 3310 true Chr06: 26261616-26264925 Phaseolus vulgaris
Phvul.006G157800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 26261616-26263615 Phaseolus vulgaris
Phvul.006G157800 2.0kb downstream 2.0kb downstream 3310 true Chr06: 26263616-26266925 Phaseolus vulgaris
Phvul.006G157800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 26264926-26266925 Phaseolus vulgaris
Phvul.006G157800 5.0kb upstream 5.0kb upstream 6310 true Chr06: 26258616-26264925 Phaseolus vulgaris
Phvul.006G157800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 26258616-26263615 Phaseolus vulgaris
Phvul.006G157800 5.0kb downstream 5.0kb downstream 6310 true Chr06: 26263616-26269925 Phaseolus vulgaris
Phvul.006G157800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 26264926-26269925 Phaseolus vulgaris
Phvul.006G157800 10.0kb upstream 10.0kb upstream 11310 true Chr06: 26253616-26264925 Phaseolus vulgaris
Phvul.006G157800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 26253616-26263615 Phaseolus vulgaris
Phvul.006G157800 10.0kb downstream 10.0kb downstream 11310 true Chr06: 26263616-26274925 Phaseolus vulgaris
Phvul.006G157800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 26264926-26274925 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310071 5265 Fabidae View MSA
124061070 5270 Rosid View MSA
123751266 5271 Pentapetalae View MSA
122795098 5272 Eudicot View MSA
122049143 5273 Angiosperm View MSA
121348944 5274 Embryophyte View MSA
123423800 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.418177 0.0 1.57037 Low  
cufflinks 1.16038 0.0 3.96943    
cufflinks 0.234287 0.0 0.929864 Low  
cufflinks 0.239872 0.0 0.936853 Low  
cufflinks 2.10475 0.0 6.67645    
cufflinks 1.39305 0.0 4.67057    
cufflinks 0.896724 0.0 3.12053    
cufflinks 0.7067 0.0 2.55131    
cufflinks 1.15328 0.0 3.90537    
cufflinks 0.0106732 0.0 0.0570896 Low Low
cufflinks 3.32005 0.0 9.9705   High

0 Strain