Gene : Phvul.006G158100 P. vulgaris v2.1
Defline:  (1 of 4) 1.8.4.12 - Peptide-methionine (R)-S-oxide reductase / Selenoprotein R Genomic Order:  1579
Name:  ? Phvul.006G158100 Secondary Identifier:  ? PAC:37172673
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G158100 0.5kb upstream 0.5kb upstream 2027 true Chr06: 26284000-26286026 Phaseolus vulgaris
Phvul.006G158100 0.5kb upstream 0.5kb upstream 500 false Chr06: 26284000-26284499 Phaseolus vulgaris
Phvul.006G158100 0.5kb downstream 0.5kb downstream 2027 true Chr06: 26284500-26286526 Phaseolus vulgaris
Phvul.006G158100 0.5kb downstream 0.5kb downstream 500 false Chr06: 26286027-26286526 Phaseolus vulgaris
Phvul.006G158100 1.0kb upstream 1.0kb upstream 2527 true Chr06: 26283500-26286026 Phaseolus vulgaris
Phvul.006G158100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 26283500-26284499 Phaseolus vulgaris
Phvul.006G158100 1.0kb downstream 1.0kb downstream 2527 true Chr06: 26284500-26287026 Phaseolus vulgaris
Phvul.006G158100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 26286027-26287026 Phaseolus vulgaris
Phvul.006G158100 2.0kb upstream 2.0kb upstream 3527 true Chr06: 26282500-26286026 Phaseolus vulgaris
Phvul.006G158100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 26282500-26284499 Phaseolus vulgaris
Phvul.006G158100 2.0kb downstream 2.0kb downstream 3527 true Chr06: 26284500-26288026 Phaseolus vulgaris
Phvul.006G158100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 26286027-26288026 Phaseolus vulgaris
Phvul.006G158100 5.0kb upstream 5.0kb upstream 6527 true Chr06: 26279500-26286026 Phaseolus vulgaris
Phvul.006G158100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 26279500-26284499 Phaseolus vulgaris
Phvul.006G158100 5.0kb downstream 5.0kb downstream 6527 true Chr06: 26284500-26291026 Phaseolus vulgaris
Phvul.006G158100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 26286027-26291026 Phaseolus vulgaris
Phvul.006G158100 10.0kb upstream 10.0kb upstream 11527 true Chr06: 26274500-26286026 Phaseolus vulgaris
Phvul.006G158100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 26274500-26284499 Phaseolus vulgaris
Phvul.006G158100 10.0kb downstream 10.0kb downstream 11527 true Chr06: 26284500-26296026 Phaseolus vulgaris
Phvul.006G158100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 26286027-26296026 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309372 5265 Fabidae View MSA
124072451 5270 Rosid View MSA
123748657 5271 Pentapetalae View MSA
122793601 5272 Eudicot View MSA
122047974 5273 Angiosperm View MSA
121348855 5274 Embryophyte View MSA
123426618 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 66.3244 0.0 171.448 High High
cufflinks 31.2868 0.0 83.0171    
cufflinks 19.5379 0.0 53.8123    
cufflinks 56.3176 0.0 145.775 High High
cufflinks 30.8879 0.0 82.094    
cufflinks 11.9803 0.0 34.5453   Low
cufflinks 16.5579 0.0 46.1111    
cufflinks 15.4636 0.0 43.3144    
cufflinks 17.7908 0.0 49.3758    
cufflinks 21.6745 0.0 59.2713    
cufflinks 36.342 0.0 95.5616 High  

0 Strain