Gene : Phvul.009G052700 P. vulgaris v2.1
Defline:  (1 of 3) PTHR23056:SF45 - CALCINEURIN B-LIKE PROTEIN 4 Genomic Order:  532
Name:  ? Phvul.009G052700 Secondary Identifier:  ? PAC:37149274
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G052700 0.5kb upstream 0.5kb upstream 4506 true Chr09: 10153582-10158087 Phaseolus vulgaris
Phvul.009G052700 0.5kb upstream 0.5kb upstream 500 false Chr09: 10153582-10154081 Phaseolus vulgaris
Phvul.009G052700 0.5kb downstream 0.5kb downstream 4506 true Chr09: 10154082-10158587 Phaseolus vulgaris
Phvul.009G052700 0.5kb downstream 0.5kb downstream 500 false Chr09: 10158088-10158587 Phaseolus vulgaris
Phvul.009G052700 1.0kb upstream 1.0kb upstream 5006 true Chr09: 10153082-10158087 Phaseolus vulgaris
Phvul.009G052700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 10153082-10154081 Phaseolus vulgaris
Phvul.009G052700 1.0kb downstream 1.0kb downstream 5006 true Chr09: 10154082-10159087 Phaseolus vulgaris
Phvul.009G052700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 10158088-10159087 Phaseolus vulgaris
Phvul.009G052700 2.0kb upstream 2.0kb upstream 6006 true Chr09: 10152082-10158087 Phaseolus vulgaris
Phvul.009G052700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 10152082-10154081 Phaseolus vulgaris
Phvul.009G052700 2.0kb downstream 2.0kb downstream 6006 true Chr09: 10154082-10160087 Phaseolus vulgaris
Phvul.009G052700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 10158088-10160087 Phaseolus vulgaris
Phvul.009G052700 5.0kb upstream 5.0kb upstream 9006 true Chr09: 10149082-10158087 Phaseolus vulgaris
Phvul.009G052700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 10149082-10154081 Phaseolus vulgaris
Phvul.009G052700 5.0kb downstream 5.0kb downstream 9006 true Chr09: 10154082-10163087 Phaseolus vulgaris
Phvul.009G052700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 10158088-10163087 Phaseolus vulgaris
Phvul.009G052700 10.0kb upstream 10.0kb upstream 14006 true Chr09: 10144082-10158087 Phaseolus vulgaris
Phvul.009G052700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 10144082-10154081 Phaseolus vulgaris
Phvul.009G052700 10.0kb downstream 10.0kb downstream 14006 true Chr09: 10154082-10168087 Phaseolus vulgaris
Phvul.009G052700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 10158088-10168087 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304999 5265 Fabidae View MSA
124065494 5270 Rosid View MSA
123741791 5271 Pentapetalae View MSA
122789949 5272 Eudicot View MSA
122051597 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350709 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.49164 0.0 14.3625    
cufflinks 0.576382 0.0 5.0249   Low
cufflinks 2.02214 0.0 12.2503    
cufflinks 0.959289 0.0 4.50569   Low
cufflinks 2.59396 0.0 15.3285    
cufflinks 0.915235 0.0 4.18664   Low
cufflinks 2.92075 0.0 16.1528    
cufflinks 1.84109 0.0 11.7195    
cufflinks 11.5098 0.0 49.3695   High
cufflinks 5.39667 0.0 29.4361   High
cufflinks 3.6977 0.0 21.9568    

0 Strain