Gene : Phvul.006G160400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24078:SF224 - DNAJ DOMAIN-CONTAINING PROTEIN Genomic Order:  1602
Name:  ? Phvul.006G160400 Secondary Identifier:  ? PAC:37173435
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G160400 0.5kb upstream 0.5kb upstream 5941 true Chr06: 26442189-26448129 Phaseolus vulgaris
Phvul.006G160400 0.5kb upstream 0.5kb upstream 500 false Chr06: 26447630-26448129 Phaseolus vulgaris
Phvul.006G160400 0.5kb downstream 0.5kb downstream 5941 true Chr06: 26441689-26447629 Phaseolus vulgaris
Phvul.006G160400 0.5kb downstream 0.5kb downstream 500 false Chr06: 26441689-26442188 Phaseolus vulgaris
Phvul.006G160400 1.0kb upstream 1.0kb upstream 6441 true Chr06: 26442189-26448629 Phaseolus vulgaris
Phvul.006G160400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 26447630-26448629 Phaseolus vulgaris
Phvul.006G160400 1.0kb downstream 1.0kb downstream 6441 true Chr06: 26441189-26447629 Phaseolus vulgaris
Phvul.006G160400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 26441189-26442188 Phaseolus vulgaris
Phvul.006G160400 2.0kb upstream 2.0kb upstream 7441 true Chr06: 26442189-26449629 Phaseolus vulgaris
Phvul.006G160400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 26447630-26449629 Phaseolus vulgaris
Phvul.006G160400 2.0kb downstream 2.0kb downstream 7441 true Chr06: 26440189-26447629 Phaseolus vulgaris
Phvul.006G160400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 26440189-26442188 Phaseolus vulgaris
Phvul.006G160400 5.0kb upstream 5.0kb upstream 10441 true Chr06: 26442189-26452629 Phaseolus vulgaris
Phvul.006G160400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 26447630-26452629 Phaseolus vulgaris
Phvul.006G160400 5.0kb downstream 5.0kb downstream 10441 true Chr06: 26437189-26447629 Phaseolus vulgaris
Phvul.006G160400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 26437189-26442188 Phaseolus vulgaris
Phvul.006G160400 10.0kb upstream 10.0kb upstream 15441 true Chr06: 26442189-26457629 Phaseolus vulgaris
Phvul.006G160400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 26447630-26457629 Phaseolus vulgaris
Phvul.006G160400 10.0kb downstream 10.0kb downstream 15441 true Chr06: 26432189-26447629 Phaseolus vulgaris
Phvul.006G160400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 26432189-26442188 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311588 5265 Fabidae View MSA
124073467 5270 Rosid View MSA
123743094 5271 Pentapetalae View MSA
122796940 5272 Eudicot View MSA
122050144 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121348216 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.88021 0.0 5.43306   Low
cufflinks 4.64981 0.0 12.4063    
cufflinks 3.57758 0.0 9.73259    
cufflinks 2.18368 0.0 6.29036   Low
cufflinks 2.79685 0.0 7.85697    
cufflinks 5.81176 0.0 15.2725   High
cufflinks 4.64671 0.0 12.3971    
cufflinks 6.01114 0.0 15.7221   High
cufflinks 4.54956 0.0 12.1838    
cufflinks 5.74542 0.0 15.1272   High
cufflinks 3.28305 0.0 9.06263    

0 Strain