Gene : Phvul.006G160800 P. vulgaris v2.1
Defline:  (1 of 3) PTHR20863:SF29 - ACYL CARRIER PROTEIN 1, CHLOROPLASTIC-RELATED Genomic Order:  1606
Name:  ? Phvul.006G160800 Secondary Identifier:  ? PAC:37172791
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G160800 0.5kb upstream 0.5kb upstream 3096 true Chr06: 26470872-26473967 Phaseolus vulgaris
Phvul.006G160800 0.5kb upstream 0.5kb upstream 500 false Chr06: 26473468-26473967 Phaseolus vulgaris
Phvul.006G160800 0.5kb downstream 0.5kb downstream 3096 true Chr06: 26470372-26473467 Phaseolus vulgaris
Phvul.006G160800 0.5kb downstream 0.5kb downstream 500 false Chr06: 26470372-26470871 Phaseolus vulgaris
Phvul.006G160800 1.0kb upstream 1.0kb upstream 3596 true Chr06: 26470872-26474467 Phaseolus vulgaris
Phvul.006G160800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 26473468-26474467 Phaseolus vulgaris
Phvul.006G160800 1.0kb downstream 1.0kb downstream 3596 true Chr06: 26469872-26473467 Phaseolus vulgaris
Phvul.006G160800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 26469872-26470871 Phaseolus vulgaris
Phvul.006G160800 2.0kb upstream 2.0kb upstream 4596 true Chr06: 26470872-26475467 Phaseolus vulgaris
Phvul.006G160800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 26473468-26475467 Phaseolus vulgaris
Phvul.006G160800 2.0kb downstream 2.0kb downstream 4596 true Chr06: 26468872-26473467 Phaseolus vulgaris
Phvul.006G160800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 26468872-26470871 Phaseolus vulgaris
Phvul.006G160800 5.0kb upstream 5.0kb upstream 7596 true Chr06: 26470872-26478467 Phaseolus vulgaris
Phvul.006G160800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 26473468-26478467 Phaseolus vulgaris
Phvul.006G160800 5.0kb downstream 5.0kb downstream 7596 true Chr06: 26465872-26473467 Phaseolus vulgaris
Phvul.006G160800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 26465872-26470871 Phaseolus vulgaris
Phvul.006G160800 10.0kb upstream 10.0kb upstream 12596 true Chr06: 26470872-26483467 Phaseolus vulgaris
Phvul.006G160800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 26473468-26483467 Phaseolus vulgaris
Phvul.006G160800 10.0kb downstream 10.0kb downstream 12596 true Chr06: 26460872-26473467 Phaseolus vulgaris
Phvul.006G160800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 26460872-26470871 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307629 5265 Fabidae View MSA
124069665 5270 Rosid View MSA
123741889 5271 Pentapetalae View MSA
122795656 5272 Eudicot View MSA
122049325 5273 Angiosperm View MSA
121348515 5274 Embryophyte View MSA
123428029 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.3933 0.0 77.5004    
cufflinks 15.1257 0.0 43.9217    
cufflinks 15.6113 0.0 45.1217    
cufflinks 348.318 0.0 982.816 High High
cufflinks 16.8671 0.0 48.731    
cufflinks 35.8591 0.0 96.2107 High  
cufflinks 43.7645 0.0 115.57 High  
cufflinks 111.794 0.0 289.801 High High
cufflinks 37.9631 0.0 101.247 High  
cufflinks 9.30072 0.0 28.6381   Low
cufflinks 28.4887 0.0 78.0655    

0 Strain