Gene : Phvul.006G159500 P. vulgaris v2.1
Defline:  (1 of 2) K11801 - WD repeat-containing protein 23 (WDR23) Genomic Order:  1593
Name:  ? Phvul.006G159500 Secondary Identifier:  ? PAC:37173793
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G159500 0.5kb upstream 0.5kb upstream 6911 true Chr06: 26355544-26362454 Phaseolus vulgaris
Phvul.006G159500 0.5kb upstream 0.5kb upstream 500 false Chr06: 26361955-26362454 Phaseolus vulgaris
Phvul.006G159500 0.5kb downstream 0.5kb downstream 6911 true Chr06: 26355044-26361954 Phaseolus vulgaris
Phvul.006G159500 0.5kb downstream 0.5kb downstream 500 false Chr06: 26355044-26355543 Phaseolus vulgaris
Phvul.006G159500 1.0kb upstream 1.0kb upstream 7411 true Chr06: 26355544-26362954 Phaseolus vulgaris
Phvul.006G159500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 26361955-26362954 Phaseolus vulgaris
Phvul.006G159500 1.0kb downstream 1.0kb downstream 7411 true Chr06: 26354544-26361954 Phaseolus vulgaris
Phvul.006G159500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 26354544-26355543 Phaseolus vulgaris
Phvul.006G159500 2.0kb upstream 2.0kb upstream 8411 true Chr06: 26355544-26363954 Phaseolus vulgaris
Phvul.006G159500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 26361955-26363954 Phaseolus vulgaris
Phvul.006G159500 2.0kb downstream 2.0kb downstream 8411 true Chr06: 26353544-26361954 Phaseolus vulgaris
Phvul.006G159500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 26353544-26355543 Phaseolus vulgaris
Phvul.006G159500 5.0kb upstream 5.0kb upstream 11411 true Chr06: 26355544-26366954 Phaseolus vulgaris
Phvul.006G159500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 26361955-26366954 Phaseolus vulgaris
Phvul.006G159500 5.0kb downstream 5.0kb downstream 11411 true Chr06: 26350544-26361954 Phaseolus vulgaris
Phvul.006G159500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 26350544-26355543 Phaseolus vulgaris
Phvul.006G159500 10.0kb upstream 10.0kb upstream 16411 true Chr06: 26355544-26371954 Phaseolus vulgaris
Phvul.006G159500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 26361955-26371954 Phaseolus vulgaris
Phvul.006G159500 10.0kb downstream 10.0kb downstream 16411 true Chr06: 26345544-26361954 Phaseolus vulgaris
Phvul.006G159500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 26345544-26355543 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306258 5265 Fabidae View MSA
124065420 5270 Rosid View MSA
123742519 5271 Pentapetalae View MSA
122785957 5272 Eudicot View MSA
122047753 5273 Angiosperm View MSA
121344393 5274 Embryophyte View MSA
123427446 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.28 0.0 32.3855    
cufflinks 8.66517 0.0 23.4774    
cufflinks 7.39576 0.0 20.2882   Low
cufflinks 8.65006 0.0 23.6448    
cufflinks 7.49557 0.0 20.7149   Low
cufflinks 8.77075 0.0 23.7299    
cufflinks 12.7876 0.0 33.7029    
cufflinks 11.2542 0.0 29.7708    
cufflinks 13.2301 0.0 34.8717   High
cufflinks 14.9467 0.0 39.0407   High
cufflinks 10.285 0.0 27.6153    

0 Strain