Gene : Phvul.009G054500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24078//PTHR24078:SF262 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED Genomic Order:  551
Name:  ? Phvul.009G054500 Secondary Identifier:  ? PAC:37148791
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G054500 0.5kb upstream 0.5kb upstream 5311 true Chr09: 10437835-10443145 Phaseolus vulgaris
Phvul.009G054500 0.5kb upstream 0.5kb upstream 500 false Chr09: 10442646-10443145 Phaseolus vulgaris
Phvul.009G054500 0.5kb downstream 0.5kb downstream 5311 true Chr09: 10437335-10442645 Phaseolus vulgaris
Phvul.009G054500 0.5kb downstream 0.5kb downstream 500 false Chr09: 10437335-10437834 Phaseolus vulgaris
Phvul.009G054500 1.0kb upstream 1.0kb upstream 5811 true Chr09: 10437835-10443645 Phaseolus vulgaris
Phvul.009G054500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 10442646-10443645 Phaseolus vulgaris
Phvul.009G054500 1.0kb downstream 1.0kb downstream 5811 true Chr09: 10436835-10442645 Phaseolus vulgaris
Phvul.009G054500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 10436835-10437834 Phaseolus vulgaris
Phvul.009G054500 2.0kb upstream 2.0kb upstream 6811 true Chr09: 10437835-10444645 Phaseolus vulgaris
Phvul.009G054500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 10442646-10444645 Phaseolus vulgaris
Phvul.009G054500 2.0kb downstream 2.0kb downstream 6811 true Chr09: 10435835-10442645 Phaseolus vulgaris
Phvul.009G054500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 10435835-10437834 Phaseolus vulgaris
Phvul.009G054500 5.0kb upstream 5.0kb upstream 9811 true Chr09: 10437835-10447645 Phaseolus vulgaris
Phvul.009G054500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 10442646-10447645 Phaseolus vulgaris
Phvul.009G054500 5.0kb downstream 5.0kb downstream 9811 true Chr09: 10432835-10442645 Phaseolus vulgaris
Phvul.009G054500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 10432835-10437834 Phaseolus vulgaris
Phvul.009G054500 10.0kb upstream 10.0kb upstream 14811 true Chr09: 10437835-10452645 Phaseolus vulgaris
Phvul.009G054500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 10442646-10452645 Phaseolus vulgaris
Phvul.009G054500 10.0kb downstream 10.0kb downstream 14811 true Chr09: 10427835-10442645 Phaseolus vulgaris
Phvul.009G054500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 10427835-10437834 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313110 5265 Fabidae View MSA
124073308 5270 Rosid View MSA
123746271 5271 Pentapetalae View MSA
122796455 5272 Eudicot View MSA
122048090 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121348216 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.65116 0.0 19.891   Low
cufflinks 12.3094 0.0 39.7197    
cufflinks 14.8433 0.0 47.9856    
cufflinks 5.72557 0.0 17.4244   Low
cufflinks 12.0419 0.0 33.7422    
cufflinks 17.5685 0.0 56.9547   High
cufflinks 13.7157 0.0 44.2088    
cufflinks 10.8281 0.0 34.9333    
cufflinks 14.9905 0.0 48.4137    
cufflinks 14.667 0.0 47.0115    
cufflinks 12.712 0.0 41.0959    

0 Strain