Gene : Phvul.006G162700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10168:SF115 - MONOTHIOL GLUTAREDOXIN-S2-RELATED Genomic Order:  1624
Name:  ? Phvul.006G162700 Secondary Identifier:  ? PAC:37172826
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris THIOREDOX-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G162700 0.5kb upstream 0.5kb upstream 1169 true Chr06: 26598717-26599885 Phaseolus vulgaris
Phvul.006G162700 0.5kb upstream 0.5kb upstream 500 false Chr06: 26598717-26599216 Phaseolus vulgaris
Phvul.006G162700 0.5kb downstream 0.5kb downstream 1169 true Chr06: 26599217-26600385 Phaseolus vulgaris
Phvul.006G162700 0.5kb downstream 0.5kb downstream 500 false Chr06: 26599886-26600385 Phaseolus vulgaris
Phvul.006G162700 1.0kb upstream 1.0kb upstream 1669 true Chr06: 26598217-26599885 Phaseolus vulgaris
Phvul.006G162700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 26598217-26599216 Phaseolus vulgaris
Phvul.006G162700 1.0kb downstream 1.0kb downstream 1669 true Chr06: 26599217-26600885 Phaseolus vulgaris
Phvul.006G162700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 26599886-26600885 Phaseolus vulgaris
Phvul.006G162700 2.0kb upstream 2.0kb upstream 2669 true Chr06: 26597217-26599885 Phaseolus vulgaris
Phvul.006G162700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 26597217-26599216 Phaseolus vulgaris
Phvul.006G162700 2.0kb downstream 2.0kb downstream 2669 true Chr06: 26599217-26601885 Phaseolus vulgaris
Phvul.006G162700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 26599886-26601885 Phaseolus vulgaris
Phvul.006G162700 5.0kb upstream 5.0kb upstream 5669 true Chr06: 26594217-26599885 Phaseolus vulgaris
Phvul.006G162700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 26594217-26599216 Phaseolus vulgaris
Phvul.006G162700 5.0kb downstream 5.0kb downstream 5669 true Chr06: 26599217-26604885 Phaseolus vulgaris
Phvul.006G162700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 26599886-26604885 Phaseolus vulgaris
Phvul.006G162700 10.0kb upstream 10.0kb upstream 10669 true Chr06: 26589217-26599885 Phaseolus vulgaris
Phvul.006G162700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 26589217-26599216 Phaseolus vulgaris
Phvul.006G162700 10.0kb downstream 10.0kb downstream 10669 true Chr06: 26599217-26609885 Phaseolus vulgaris
Phvul.006G162700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 26599886-26609885 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310406 5265 Fabidae View MSA
124065787 5270 Rosid View MSA
123750086 5271 Pentapetalae View MSA
122796200 5272 Eudicot View MSA
122047042 5273 Angiosperm View MSA
121349593 5274 Embryophyte View MSA
123381368 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.359187 0.0 1.48994 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9.7441 0.0 29.3331   High
cufflinks 0.340531 0.0 1.42326 Low  
cufflinks 0.101456 0.0 0.476394 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9.60817 0.0 29.2387   High
cufflinks 0.243773 0.0 1.04913 Low  

0 Strain