Gene : Phvul.009G055300 P. vulgaris v2.1
Defline:  (1 of 1) K00938 - phosphomevalonate kinase (E2.7.4.2, mvaK2) Genomic Order:  559
Name:  ? Phvul.009G055300 Secondary Identifier:  ? PAC:37151001
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5910 Phaseolus vulgaris pathologic  
Pvulgaris PWY-922 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G055300 0.5kb upstream 0.5kb upstream 8329 true Chr09: 10507164-10515492 Phaseolus vulgaris
Phvul.009G055300 0.5kb upstream 0.5kb upstream 500 false Chr09: 10514993-10515492 Phaseolus vulgaris
Phvul.009G055300 0.5kb downstream 0.5kb downstream 8329 true Chr09: 10506664-10514992 Phaseolus vulgaris
Phvul.009G055300 0.5kb downstream 0.5kb downstream 500 false Chr09: 10506664-10507163 Phaseolus vulgaris
Phvul.009G055300 1.0kb upstream 1.0kb upstream 8829 true Chr09: 10507164-10515992 Phaseolus vulgaris
Phvul.009G055300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 10514993-10515992 Phaseolus vulgaris
Phvul.009G055300 1.0kb downstream 1.0kb downstream 8829 true Chr09: 10506164-10514992 Phaseolus vulgaris
Phvul.009G055300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 10506164-10507163 Phaseolus vulgaris
Phvul.009G055300 2.0kb upstream 2.0kb upstream 9829 true Chr09: 10507164-10516992 Phaseolus vulgaris
Phvul.009G055300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 10514993-10516992 Phaseolus vulgaris
Phvul.009G055300 2.0kb downstream 2.0kb downstream 9829 true Chr09: 10505164-10514992 Phaseolus vulgaris
Phvul.009G055300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 10505164-10507163 Phaseolus vulgaris
Phvul.009G055300 5.0kb upstream 5.0kb upstream 12829 true Chr09: 10507164-10519992 Phaseolus vulgaris
Phvul.009G055300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 10514993-10519992 Phaseolus vulgaris
Phvul.009G055300 5.0kb downstream 5.0kb downstream 12829 true Chr09: 10502164-10514992 Phaseolus vulgaris
Phvul.009G055300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 10502164-10507163 Phaseolus vulgaris
Phvul.009G055300 10.0kb upstream 10.0kb upstream 17829 true Chr09: 10507164-10524992 Phaseolus vulgaris
Phvul.009G055300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 10514993-10524992 Phaseolus vulgaris
Phvul.009G055300 10.0kb downstream 10.0kb downstream 17829 true Chr09: 10497164-10514992 Phaseolus vulgaris
Phvul.009G055300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 10497164-10507163 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302119 5265 Fabidae View MSA
124060690 5270 Rosid View MSA
123748529 5271 Pentapetalae View MSA
122787383 5272 Eudicot View MSA
122043495 5273 Angiosperm View MSA
121345412 5274 Embryophyte View MSA
123380212 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.426 0.0 39.9102   Low
cufflinks 25.997 0.0 67.5899    
cufflinks 13.5985 0.0 35.2712   Low
cufflinks 18.6991 0.0 48.3345    
cufflinks 22.2139 0.0 57.5065    
cufflinks 19.5178 0.0 50.464    
cufflinks 27.8591 0.0 72.7133 High  
cufflinks 22.4849 0.0 58.3026    
cufflinks 21.4438 0.0 55.5073    
cufflinks 60.2292 0.0 166.094 High High
cufflinks 24.6227 0.0 63.8768    

0 Strain