Gene : Phvul.006G163300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12506:SF27 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 34-RELATED Genomic Order:  1630
Name:  ? Phvul.006G163300 Secondary Identifier:  ? PAC:37174230
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G163300 0.5kb upstream 0.5kb upstream 10369 true Chr06: 26634344-26644712 Phaseolus vulgaris
Phvul.006G163300 0.5kb upstream 0.5kb upstream 500 false Chr06: 26644213-26644712 Phaseolus vulgaris
Phvul.006G163300 0.5kb downstream 0.5kb downstream 10369 true Chr06: 26633844-26644212 Phaseolus vulgaris
Phvul.006G163300 0.5kb downstream 0.5kb downstream 500 false Chr06: 26633844-26634343 Phaseolus vulgaris
Phvul.006G163300 1.0kb upstream 1.0kb upstream 10869 true Chr06: 26634344-26645212 Phaseolus vulgaris
Phvul.006G163300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 26644213-26645212 Phaseolus vulgaris
Phvul.006G163300 1.0kb downstream 1.0kb downstream 10869 true Chr06: 26633344-26644212 Phaseolus vulgaris
Phvul.006G163300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 26633344-26634343 Phaseolus vulgaris
Phvul.006G163300 2.0kb upstream 2.0kb upstream 11869 true Chr06: 26634344-26646212 Phaseolus vulgaris
Phvul.006G163300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 26644213-26646212 Phaseolus vulgaris
Phvul.006G163300 2.0kb downstream 2.0kb downstream 11869 true Chr06: 26632344-26644212 Phaseolus vulgaris
Phvul.006G163300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 26632344-26634343 Phaseolus vulgaris
Phvul.006G163300 5.0kb upstream 5.0kb upstream 14869 true Chr06: 26634344-26649212 Phaseolus vulgaris
Phvul.006G163300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 26644213-26649212 Phaseolus vulgaris
Phvul.006G163300 5.0kb downstream 5.0kb downstream 14869 true Chr06: 26629344-26644212 Phaseolus vulgaris
Phvul.006G163300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 26629344-26634343 Phaseolus vulgaris
Phvul.006G163300 10.0kb upstream 10.0kb upstream 19869 true Chr06: 26634344-26654212 Phaseolus vulgaris
Phvul.006G163300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 26644213-26654212 Phaseolus vulgaris
Phvul.006G163300 10.0kb downstream 10.0kb downstream 19869 true Chr06: 26624344-26644212 Phaseolus vulgaris
Phvul.006G163300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 26624344-26634343 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297182 5265 Fabidae View MSA
124065869 5270 Rosid View MSA
123744016 5271 Pentapetalae View MSA
122797715 5272 Eudicot View MSA
122047734 5273 Angiosperm View MSA
121348027 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.15305 0.0 20.5387   Low
cufflinks 13.8697 0.0 40.8334    
cufflinks 11.9999 0.0 35.6152    
cufflinks 16.3663 0.0 46.8543    
cufflinks 11.9643 0.0 35.4077    
cufflinks 14.3735 0.0 41.6766    
cufflinks 9.60108 0.0 29.8134    
cufflinks 15.945 0.0 46.0751    
cufflinks 8.02522 0.0 25.295   Low
cufflinks 15.0874 0.0 43.5558    
cufflinks 15.2866 0.0 44.0808    

0 Strain